Escherichia coli Escherichia coli EC16256 |
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Putative Escherichia coli Escherichia coli EC16256 RM systems
Ref: Peirano,G. and Pitout,J. unpublished
REBASE ref # 37602
| Sequence length: | GenBank #: | |
| Chromosome: | 5,090,635 bp | CP135221 |
| plasmid pEC16256-1: | 108,010 bp | CP135220 |
REBASE acronym: Eco6256
Org_num: 72045
All begin RRI73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17790 | endoribonuclease SymE | |||
| 17795 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco6256ORF17805P |
| 17800 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco6256ORF17805P |
| 17805 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco6256ORF17805P |
| 17810 | restriction endonuclease | |||
| 19865 | ash family protein | |||
| 19870 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco6256ORF19875P |
| 19875 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco6256ORF19875P |
| 19880 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco6256ORF19875P |
| 19885 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pEC16256-1 | ||||
| 595 | IS1-like element IS1B family transposase | |||
| 600 | M | M.EcoEC0899ORF26310P (100% identity) | M.Eco6256ORF600P | |
| 605 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4160 | drug/metabolite exporter YedA | |||
| 4165 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco6256DcmP |
| 4170 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco6256DcmP |
| 4175 | phosphohydrolase | |||
| 7305 | PerC family transcriptional regulator | |||
| 7310 | M | M.Esp911AORF3194P (100% identity) | GATC | M.Eco6256ORF7310P |
| 7315 | DUF1382 family protein | |||
| 11760 | DNA-binding transcriptional regulator Fis | |||
| 11765 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco6256ORF11765P |
| 11770 | DUF2556 family protein | |||
| 12360 | ribulose-phosphate 3-epimerase | |||
| 12365 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco6256DamP |
| 12370 | cell division protein DamX | |||
| 13885 | BREX system P-loop protein BrxC | |||
| 13890 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco6256ORF13890P |
| 13895 | BREX-1 system phosphatase PglZ type A | |||
| 19650 | PerC family transcriptional regulator | |||
| 19655 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.Eco6256ORF19655P |
| 19660 | LexA family transcriptional regulator | |||
| 19695 | 67 aa hypothetical protein | |||
| 19700 | M | M.Sso63633ORF22290P (100% identity) | M.Eco6256ORF19700P | |
| 19705 | phage lysis protein EssD | |||
| 23380 | 71 aa hypothetical protein | |||
| 23385 | M | M.KpnYN1ORFGP (89% identity) | M.Eco6256ORF23385P | |
| 23390 | helix-turn-helix transcriptional regulator | |||
| 25680 | TrmB family transcriptional regulator | |||
| 25685 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco6256ORF25685P |
| 25700 | DUF3927 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17805 | class I SAM-dependent DNA methyltransferase | |||
| 17810 | R | Ecou021MrrP (100% identity) | Eco6256MrrP | |
| 17815 | BrnT family toxin | |||