Escherichia coli Escherichia coli EC16639 |
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Putative Escherichia coli Escherichia coli EC16639 RM systems
Ref: Peirano,G. and Pitout,J. unpublished
REBASE ref # 37602
| Sequence length: | GenBank #: | |
| Chromosome: | 4,878,466 bp | CP135235 |
| plasmid pEC16639-1: | 137,178 bp | CP135234 |
REBASE acronym: Eco639
Org_num: 72048
All begin RRI74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19020 | type IV toxin-antitoxin system AbiEi family | |||
| 19025 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco639ORF19030P |
| 19030 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco639ORF19030P |
| 19035 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco639ORF19030P |
| 19040 | ash family protein | |||
| plasmid pEC16639-1 | ||||
| 755 | IS1-like element IS1A family transposase | |||
| 760 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco639ORF770P |
| 765 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S1.Eco639ORF770P |
| 770 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco639ORF770P |
| 775 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3140 | DUF2556 family protein | |||
| 3145 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco639ORF3145P |
| 3150 | DNA-binding transcriptional regulator Fis | |||
| 10545 | phosphohydrolase | |||
| 10550 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco639DcmP |
| 10555 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco639DcmP |
| 10560 | drug/metabolite exporter YedA | |||
| 20960 | McrC family protein | |||
| 20965 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco639ORF20970P |
| 20970 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco639ORF20970P |
| 20975 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco639ORF20970P |
| 20980 | helix-turn-helix domain-containing protein | |||
| 21250 | 174 aa hypothetical protein | |||
| 21255 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco639ORF21255P |
| 21260 | ATP-binding protein | |||
| 21265 | response regulator receiver domain | |||
| 21270 | R | Ecos19ORF20635P (100% identity) | Eco639ORF21270P | |
| 21275 | 97 aa hypothetical protein | |||
| plasmid pEC16639-1 | ||||
| 695 | 73 aa hypothetical protein | |||
| 700 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco639ORF700P |
| 705 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20950 | glycosyltransferase family 2 protein | |||
| 20955 | R | EcosS3McrBP (100% identity) | Eco639McrBP | |
| 20960 | R | EcosS9McrCP (100% identity) | Eco639McrCP | |
| 20965 | Alw26I/Eco31I/Esp3I family type II restriction | |||