Escherichia coli Escherichia coli AZ1114 |
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Putative Escherichia coli Escherichia coli AZ1114 RM systems
Ref: Peirano,G. and Pitout,J. unpublished
REBASE ref # 37602
| Sequence length: | GenBank #: | |
| Chromosome: | 4,729,701 bp | CP135204 |
| plasmid pAZ1114-1: | 117,395 bp | CP135205 |
REBASE acronym: Eco1114
Org_num: 72041
All begin RRI72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 655 | integrase core domain-containing protein | |||
| 660 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco1114ORF660P |
| 665 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco1114ORF660P |
| 670 | R | Sen12509ORF5865P (99% identity) | ACAYNNNNCTG | Eco1114ORF660P |
| 675 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3850 | DNA-binding transcriptional regulator Fis | |||
| 3855 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco1114ORF3855P |
| 3860 | DUF2556 family protein | |||
| 4475 | ribulose-phosphate 3-epimerase | |||
| 4480 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1114DamP |
| 4485 | cell division protein DamX | |||
| 20200 | drug/metabolite exporter YedA | |||
| 20205 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco1114DcmP |
| 20210 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1114DcmP |
| 20215 | phosphohydrolase | |||
| plasmid pAZ1114-1 | ||||
| 23365 | 103 aa hypothetical protein | |||
| 23370 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco1114ORF23370P | |
| 23375 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16145 | recombinase family protein | |||
| 16150 | R | EcoteDMcrBP (100% identity) | Eco1114McrBP | |
| 16155 | R | EmaE2C08McrCP (100% identity) | Eco1114McrCP | |
| 16160 | isocitrate/isopropylmalate family dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14580 | TraR/DksA family transcriptional regulator | |||
| 14585 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco1114ORF14585P |
| 14590 | replication endonuclease | |||