Escherichia coli 284 |
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Putative Escherichia coli 284 RM systems
Ref: Shropshire,W.C. et al. unpublished
REBASE ref # 36584
Complete sequence: 4,711,749 bp
GenBank #: CP134923
REBASE acronym: Eco84
Org_num: 71911
All begin RNP63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 950 | helix-turn-helix domain-containing protein | |||
| 955 | M | M.Pre393ORF2750P (100% identity) | M.Eco84ORF955P | |
| 960 | S | S.EcotcmA3ORF16550P (100% identity) | S.Eco84ORF955P | |
| 965 | RecQ family ATP-dependent DNA helicase | |||
| 970 | DNA-processing protein DprA | |||
| 975 | R | EcotcmA3ORF16550P (100% identity) | Eco84ORF955P | |
| 980 | IS3-like element ISSen4 family transposase | |||
| 12535 | SprT family zinc-dependent metalloprotease | |||
| 12540 | R | EcosNDM5ORF9185P (100% identity) | Eco84ORF12540P | |
| 12545 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | replication endonuclease | |||
| 15 | M | M.SspS13ORF1655P (100% identity) | GTCGAC | M.Eco84ORF15P |
| 20 | R | SspS13ORF1655P (100% identity) | GTCGAC | R1.Eco84ORF15P |
| 25 | R | R1.SenXB08ORF22340P (100% identity) | GTCGAC | R2.Eco84ORF15P |
| 30 | phage portal protein | |||
| 2235 | sigma 54-interacting transcriptional regulator | |||
| 2240 | R | Ecop10BORF20145P (100% identity) | Eco84ORF2240P | |
| 2245 | IS21-like element IS100 family transposase | |||
| 4350 | 67 aa hypothetical protein | |||
| 4355 | M | M.SflSTLE1ORF5465P (100% identity) | M.Eco84ORF4355P | |
| 4360 | phage holin, lambda family | |||
| 12860 | drug/metabolite exporter YedA | |||
| 12865 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco84DcmP |
| 12870 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco84DcmP |
| 12875 | phosphohydrolase | |||
| 19490 | DNA-binding transcriptional regulator Fis | |||
| 19495 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco84ORF19495P |
| 19500 | DUF2556 family protein | |||
| 20125 | ribulose-phosphate 3-epimerase | |||
| 20130 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco84DamP |
| 20135 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2390 | IS1-like element IS1A family transposase | |||
| 2395 | R | SflSTLE4McrBP (30% identity) | Eco84McrBP | |
| 2400 | R | SflSTLE4McrCP (100% identity) | Eco84McrCP | |
| 2405 | HNH endonuclease | |||
| 4510 | 28 aa hypothetical protein | |||
| 4515 | R | Ecop10BGmrSDP (100% identity) | Eco84GmrSDP | |
| 4520 | DinI family protein | |||