Escherichia coli 3797 |
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Putative Escherichia coli 3797 RM systems
Ref: Shropshire,W.C. et al. unpublished
REBASE ref # 36584
| Sequence length: | GenBank #: | |
| Chromosome: | 4,987,532 bp | CP134898 |
| plasmid pMB3565_1: | 122,370 bp | CP134899 |
| plasmid pMB3565_5: | 4,153 bp | CP134903 |
REBASE acronym: Eco3797
Org_num: 71879
All begin RNP36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20475 | restriction endonuclease | |||
| 20480 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco3797ORF20480P |
| 20485 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco3797ORF20480P |
| 20490 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco3797ORF20480P |
| 20495 | endoribonuclease SymE | |||
| plasmid pMB3565_1 | ||||
| 24825 | type II toxin-antitoxin system Phd/YefM family | |||
| 24830 | M | M.SenceORFJP (97% identity) | M.Eco3797ORF24830P | |
| 24835 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3797DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco3797ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 13085 | DUF3927 family protein | |||
| 13100 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco3797ORF13100P |
| 13105 | TrmB family transcriptional regulator | |||
| 15390 | helix-turn-helix transcriptional regulator | |||
| 15395 | M | M.KpnYN1ORFGP (89% identity) | M.Eco3797ORF15395P | |
| 15400 | 71 aa hypothetical protein | |||
| 20830 | McrC family protein | |||
| 20835 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco3797ORF20840P |
| 20840 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco3797ORF20840P |
| 20845 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco3797ORF20840P |
| 20850 | helix-turn-helix domain-containing protein | |||
| plasmid pMB3565_1 | ||||
| 24885 | 103 aa hypothetical protein | |||
| 24890 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco3797ORF24890P |
| 24895 | 73 aa hypothetical protein | |||
| plasmid pMB3565_5 | ||||
| 25635 | R | Kpn93972ORF27090P (99% identity) | Eco3797ORF25640P | |
| 25640 | M | M.EcoF467ORF47850P (99% identity) | M.Eco3797ORF25640P | |
| 25645 | replication initiation protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20470 | BrnT family toxin | |||
| 20475 | R | Ecou021MrrP (100% identity) | Eco3797MrrP | |
| 20480 | class I SAM-dependent DNA methyltransferase | |||
| 20820 | glycosyltransferase family 2 protein | |||
| 20825 | R | EcosS3McrBP (100% identity) | Eco3797McrBP | |
| 20830 | R | EcosS9McrCP (100% identity) | Eco3797McrCP | |
| 20835 | Alw26I/Eco31I/Esp3I family type II restriction | |||