Escherichia coli RIVM_C029670 |
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Putative Escherichia coli RIVM_C029670 RM systems
Ref: Hendrickx,A.P.A. unpublished
REBASE ref # 37550
Complete sequence: 5,185,030 bp
GenBank #: CP134718
REBASE acronym: Eco670
Org_num: 71817
All begin RM371_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15330 | transcription factor | |||
| 15335 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco670ORF15335P |
| 15340 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S1.Eco670ORF15335P |
| 15345 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 15350 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 15355 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco670ORF15335P |
| 15360 | SprT family zinc-dependent metalloprotease | |||
| 21110 | DUF262 domain-containing HNH endonuclease family | |||
| 21115 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco670ORF21120P |
| 21120 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco670ORF21120P |
| 21125 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco670ORF21120P |
| 21130 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1715 | cell division protein DamX | |||
| 1720 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco670DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco670ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 6600 | ANR family transcriptional regulator | |||
| 6605 | M | M1.Ecoi127aORF1280P (100% identity) | M1.Eco670ORF6605P | |
| 6610 | VRR-NUC domain-containing protein | |||
| 6615 | M | M.EcoSTEC640ORF7045P (100% identity) | M2.Eco670ORF6605P | |
| 6620 | 106 aa hypothetical protein | |||
| 9975 | phosphohydrolase | |||
| 9980 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco670DcmP |
| 9985 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco670DcmP |
| 9990 | drug/metabolite exporter YedA | |||
| 20835 | phage holin, lambda family | |||
| 20840 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco670ORF20840P | |
| 20845 | 67 aa hypothetical protein | |||
| 20880 | LexA family transcriptional regulator | |||
| 20885 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco670ORF20885P |
| 20890 | PerC family transcriptional regulator | |||
| 21300 | HNH endonuclease | |||
| 21305 | R | Ecoi127aORF4076P (100% identity) | Eco670ORF21305P | |
| 21310 | peptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21130 | endoribonuclease SymE | |||
| 21135 | R | EcoUTGmrSD2P (52% identity) | Eco670GmrSDP | |
| 21140 | DUF262 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13915 | NinE family protein | |||
| 13920 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco670ORF13920P |
| 13925 | recombination protein NinB | |||