Escherichia coli RIVM_C036204 |
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Putative Escherichia coli RIVM_C036204 RM systems
Ref: Hendrickx,A.P.A. unpublished
REBASE ref # 37550
Complete sequence: 5,182,390 bp
GenBank #: CP134717
REBASE acronym: Eco6204
Org_num: 71818
All begin RM376_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15325 | transcription factor | |||
| 15330 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco6204ORF15330P |
| 15335 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S1.Eco6204ORF15330P |
| 15340 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 15345 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 15350 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco6204ORF15330P |
| 15355 | SprT family zinc-dependent metalloprotease | |||
| 21100 | DUF262 domain-containing HNH endonuclease family | |||
| 21105 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco6204ORF21110P |
| 21110 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco6204ORF21110P |
| 21115 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco6204ORF21110P |
| 21120 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1715 | cell division protein DamX | |||
| 1720 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco6204DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco6204ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 6595 | ANR family transcriptional regulator | |||
| 6600 | M | M1.Ecoi127aORF1280P (100% identity) | M1.Eco6204ORF6600P | |
| 6605 | VRR-NUC domain-containing protein | |||
| 6610 | M | M.EcoSTEC640ORF7045P (100% identity) | M2.Eco6204ORF6600P | |
| 6615 | 106 aa hypothetical protein | |||
| 9970 | phosphohydrolase | |||
| 9975 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco6204DcmP |
| 9980 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco6204DcmP |
| 9985 | drug/metabolite exporter YedA | |||
| 20820 | phage holin, lambda family | |||
| 20825 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco6204ORF20825P | |
| 20830 | 67 aa hypothetical protein | |||
| 20865 | LexA family transcriptional regulator | |||
| 20870 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco6204ORF20870P |
| 20875 | PerC family transcriptional regulator | |||
| 21290 | HNH endonuclease | |||
| 21295 | R | Ecoi127aORF4076P (100% identity) | Eco6204ORF21295P | |
| 21300 | peptidase | |||
| 21595 | conjugal transfer protein TraG N-terminal | |||
| 21600 | M | M.EcosS3ORF15775P (100% identity) | M.Eco6204ORF21600P | |
| 21605 | R | EcosS3ORF15775P (100% identity) | Eco6204ORF21600P | |
| 21610 | response regulator receiver domain | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13910 | NinE family protein | |||
| 13915 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco6204ORF13915P |
| 13920 | recombination protein NinB | |||