Escherichia coli RIVM_C040753 |
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Putative Escherichia coli RIVM_C040753 RM systems
Ref: Hendrickx,A.P.A. unpublished
REBASE ref # 37550
Complete sequence: 5,185,808 bp
GenBank #: CP134715
REBASE acronym: Eco0753
Org_num: 71820
All begin RM375_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15350 | transcription factor | |||
| 15355 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco0753ORF15355P |
| 15360 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S1.Eco0753ORF15355P |
| 15365 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 15370 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 15375 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco0753ORF15355P |
| 15380 | SprT family zinc-dependent metalloprotease | |||
| 21135 | DUF262 domain-containing HNH endonuclease family | |||
| 21140 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco0753ORF21145P |
| 21145 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco0753ORF21145P |
| 21150 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco0753ORF21145P |
| 21155 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1715 | cell division protein DamX | |||
| 1720 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0753DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco0753ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 6595 | ANR family transcriptional regulator | |||
| 6600 | M | M1.Ecoi127aORF1280P (100% identity) | M1.Eco0753ORF6600P | |
| 6605 | VRR-NUC domain-containing protein | |||
| 6610 | M | M.EcoSTEC640ORF7045P (100% identity) | M2.Eco0753ORF6600P | |
| 6615 | 106 aa hypothetical protein | |||
| 9970 | phosphohydrolase | |||
| 9975 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco0753DcmP |
| 9980 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco0753DcmP |
| 9985 | drug/metabolite exporter YedA | |||
| 20860 | phage holin, lambda family | |||
| 20865 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco0753ORF20865P | |
| 20870 | 67 aa hypothetical protein | |||
| 20905 | LexA family transcriptional regulator | |||
| 20910 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco0753ORF20910P |
| 20915 | PerC family transcriptional regulator | |||
| 21325 | HNH endonuclease | |||
| 21330 | R | Ecoi127aORF4076P (100% identity) | Eco0753ORF21330P | |
| 21335 | peptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21155 | endoribonuclease SymE | |||
| 21160 | R | EcoUTGmrSD2P (52% identity) | Eco0753GmrSDP | |
| 21165 | DUF262 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13920 | NinE family protein | |||
| 13925 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco0753ORF13925P |
| 13930 | recombination protein NinB | |||