Escherichia coli TUM12355 |
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Putative Escherichia coli TUM12355 RM systems
Ref: Aoki,K. unpublished
REBASE ref # 37508
| Sequence length: | GenBank #: | |
| Chromosome: | 4,737,646 bp | CP134376 |
| plasmid pMTY12355_3: | 92,738 bp | CP134379 |
| plasmid pMTY12355_IncI1-I-X1: | 109,106 bp | CP134378 |
REBASE acronym: Eco355
Org_num: 71630
All begin RJ644_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1735 | cell division protein DamX | |||
| 1740 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco355DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco355ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 4065 | integrase | |||
| 4070 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco355ORF4070P |
| 4075 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco355ORF4070P |
| 4080 | IS3 family transposase | |||
| 9550 | phosphohydrolase | |||
| 9555 | M | M.EcosEC29DcmP (100% identity) | CCWGG | M.Eco355DcmP |
| 9560 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco355DcmP |
| 9565 | drug/metabolite exporter YedA | |||
| 19770 | HNH endonuclease | |||
| 19775 | R | Eco355ORF19900P (100% identity) | Eco355ORF19775P | |
| 19780 | AAA family ATPase | |||
| 19895 | HNH endonuclease | |||
| 19900 | R | Eco355ORF19775P (100% identity) | Eco355ORF19900P | |
| 19905 | AAA family ATPase | |||
| plasmid pMTY12355_3 | ||||
| 24625 | glutamine--tRNA ligase | |||
| ??? | M | M.SenThORF23620P (100% identity) | M.Eco355ORF24630P | |
| 24635 | 216 aa hypothetical protein | |||
| plasmid pMTY12355_IncI1-I-X1 | ||||
| 24145 | 103 aa hypothetical protein | |||
| 24150 | M | M.EcoPK8241ORF27820P (100% identity) | M.Eco355ORF24150P | |
| 24155 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19775 | HNH endonuclease | |||
| 19780 | R | SflN101McrBP (100% identity) | Eco355McrBP | |
| 19785 | R | SflN101McrCP (100% identity) | Eco355McrCP | |
| 19790 | 128 aa hypothetical protein | |||
| 19900 | HNH endonuclease | |||
| 19905 | R | SflN101McrBP (100% identity) | Eco355McrB2P | |
| 19910 | R | SflN101McrCP (100% identity) | Eco355McrC2P | |
| 19915 | 128 aa hypothetical protein | |||