Escherichia coli M23312 |
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Putative Escherichia coli M23312 RM systems
Ref: Martino,F. unpublished
REBASE ref # 37507
| Sequence length: | GenBank #: | |
| Chromosome: | 4,633,749 bp | CP133943 |
| plasmid pEco_M23312_157: | 157,572 bp | CP133945 |
| plasmid pEco_M23312_272: | 272,608 bp | CP133944 |
| plasmid pEco_M23312_49: | 49,532 bp | CP133948 |
REBASE acronym: Eco3312
Org_num: 71625
All begin RHT79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3235 | type IV toxin-antitoxin system AbiEi family | |||
| 3240 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco3312ORF3245P |
| 3245 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco3312ORF3245P |
| 3250 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco3312ORF3245P |
| 3255 | ash family protein | |||
| 5075 | DUF262 domain-containing protein | |||
| 5080 | M | M.EcoZ247ORF19790P (100% identity) | M.Eco3312ORF5080P | |
| 5085 | S | S.EcoZ247ORF19790P (100% identity) | S.Eco3312ORF5080P | |
| 5090 | R | EcoZ247ORF19790P (100% identity) | Eco3312ORF5080P | |
| 5095 | 237 aa hypothetical protein | |||
| 5415 | toll/interleukin-1 receptor domain-containing | |||
| 5420 | M | M.EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | M.Eco3312ORF5420P |
| 5425 | S | S.EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | S.Eco3312ORF5420P |
| 5430 | DUF4268 domain-containing protein | |||
| 5435 | R | EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | Eco3312ORF5420P |
| 5440 | 165 aa hypothetical protein | |||
| plasmid pEco_M23312_49 | ||||
| 25960 | GTPase family protein | |||
| 25965 | M | M.EcoRL21ORF23455P (99% identity) | M.Eco3312ORF25965P | |
| 25970 | S | S.Eco281ORF815P (70% identity) | S1.Eco3312ORF25965P | |
| 25975 | R | Eco61772ORF23120P (99% identity) | Eco3312ORF25965P | |
| ??? | S | S2.Eco46C16ORF14780P (62% identity) | S2.Eco3312ORF25965P | |
| 25985 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5440 | 165 aa hypothetical protein | |||
| 5445 | R | EcoW004ORF18630P (100% identity) | GAAC | Eco3312ORF5445P |
| 5450 | integrase arm-type DNA-binding domain-containing | |||
| 10460 | cell division protein DamX | |||
| 10465 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3312DamP |
| 10470 | ribulose-phosphate 3-epimerase | |||
| 11060 | DUF2556 family protein | |||
| 11065 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco3312ORF11065P |
| 11070 | DNA-binding transcriptional regulator Fis | |||
| 18205 | phosphohydrolase | |||
| 18210 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco3312DcmP |
| 18215 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco3312DcmP |
| 18220 | drug/metabolite exporter YedA | |||
| plasmid pEco_M23312_157 | ||||
| 24460 | 73 aa hypothetical protein | |||
| 24465 | M | M.Sen527ORF25750P (100% identity) | M.Eco3312ORF24465P | |
| 24470 | 97 aa hypothetical protein | |||
| plasmid pEco_M23312_272 | ||||
| 23090 | 55 aa hypothetical protein | |||
| 23095 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco3312ORF23095P |
| 23100 | thermonuclease family protein | |||
| 23795 | DNA-binding protein | |||
| 23800 | M | M.YpsF1ORFDP (95% identity) | M.Eco3312ORF23800P | |
| 23805 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5065 | cell filamentation protein Fic | |||
| ??? | R | EcoW004GmrDP (100% identity) | Eco3312GmrSDP | |
| 5080 | class I SAM-dependent DNA methyltransferase | |||