Escherichia coli DH5-alpha-pBACpAK-COL |
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Putative Escherichia coli DH5-alpha-pBACpAK-COL RM systems
Ref: Goodman,R.N. et al. J Microbiol Methods 213, 106813 (2023)
REBASE ref # 37506
Complete sequence: 4,584,757 bp
GenBank #: CP125701
REBASE acronym: EcoOL
Org_num: 71606
All begin QL124_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5935 | DUF4060 family protein | |||
| 5940 | M | M.SenHNK130ORF1185P (95% identity) | M.EcoOLORF5940P | |
| 5945 | DUF1317 family protein | |||
| 9905 | drug/metabolite exporter YedA | |||
| 9910 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoOLDcmP |
| 9915 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoOLDcmP |
| 9920 | phosphohydrolase | |||
| 16455 | DNA-binding transcriptional regulator Fis | |||
| 16460 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoOLORF16460P |
| 16465 | DUF2556 family protein | |||
| 17080 | ribulose-phosphate 3-epimerase | |||
| 17085 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoOLDamP |
| 17090 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5395 | site-specific DNA recombinase | |||
| 5400 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoOLORF5400P |
| 5405 | isocitrate/isopropylmalate family dehydrogenase | |||
| 22050 | 978 aa hypothetical protein | |||
| 22055 | R | SenHNK130McrCP (100% identity) | EcoOLMcrCP | |
| 22060 | R | SenHNK130McrBP (100% identity) | EcoOLMcrBP | |
| 22065 | endoribonuclease SymE | |||
| 22080 | type I restriction-modification system | |||
| 22085 | R | SenHNK130MrrP (100% identity) | EcoOLMrrP | |
| 22090 | GTPase | |||