Escherichia albertii EA04 |
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Putative Escherichia albertii EA04 RM systems
Ref: Wang,S. et al. unpublished
REBASE ref # 37450
| Sequence length: | GenBank #: | |
| Chromosome: | 4,733,009 bp | CP130156 |
| plasmid pEA04.1: | 192,284 bp | CP130157 |
| plasmid pEA04.2: | 75,276 bp | CP130158 |
REBASE acronym: EalEA04
Org_num: 71384
All begin Q0121_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5600 | IS1 family transposase | |||
| 5605 | R | EalKF1ORF3355P (100% identity) | ACAYNNNNCTG | EalEA04ORF5615P |
| 5610 | S | S.Sen12509ORF5865P (99% identity) | ACAYNNNNCTG | S.EalEA04ORF5615P |
| 5615 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EalEA04ORF5615P |
| 5620 | integrase core domain-containing protein | |||
| 19790 | Fic family protein | |||
| 19795 | R | Eal165ORF19830P (100% identity) | EalEA04ORF19800P | |
| 19800 | M | M.EalLWGAORF20085P (100% identity) | M.EalEA04ORF19800P | |
| 19805 | S | S.EalLWGAORF20085P (100% identity) | S.EalEA04ORF19800P | |
| 19810 | transposase | |||
| 20060 | IS66-like element ISEc8 family transposase | |||
| 20065 | R | EalLWGAORF20570P (100% identity) | EalEA04ORF20075P | |
| 20070 | S | S.EalLWGAORF20570P (100% identity) | S.EalEA04ORF20075P | |
| 20075 | M | M.EalLWGAORF20570P (100% identity) | M.EalEA04ORF20075P | |
| 20080 | McrB family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1870 | cell division protein DamX | |||
| 1875 | M | M.Eco4356DamP (100% identity) | GATC | M.EalEA04DamP |
| 1880 | ribulose-phosphate 3-epimerase | |||
| 2375 | DUF2556 family protein | |||
| 2380 | M | M.Eco4356ORFEP (99% identity) | M.EalEA04ORF2380P | |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 5735 | PerC family transcriptional regulator | |||
| 5740 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EalEA04ORF5740P |
| 5745 | LexA family transcriptional regulator | |||
| 5780 | 95 aa hypothetical protein | |||
| 5785 | M | M.EcoE51ORF25505P (99% identity) | M.EalEA04ORF5785P | |
| 5790 | phage lysis protein EssD | |||
| 5920 | 257 aa hypothetical protein | |||
| 5925 | M | M.Sso8033ORF3755P (99% identity) | M.EalEA04ORF5925P | |
| 5930 | R | Sso8033ORF3755P (99% identity) | CCWGG | EalEA04ORF5925P |
| 5935 | 121 aa hypothetical protein | |||
| 9330 | TrmB family transcriptional regulator | |||
| 9335 | M | M.EcoS7438ORFNP (100% identity) | M.EalEA04ORF9335P | |
| 9350 | DUF3927 family protein | |||
| 9470 | phosphohydrolase | |||
| 9475 | M | M.EalKF1DcmP (100% identity) | CCWGG | M.EalEA04DcmP |
| 9480 | V | V.Eco4356DcmP (100% identity) | V.EalEA04DcmP | |
| 9485 | drug/metabolite exporter YedA | |||
| 18170 | flagellar basal body P-ring formation chaperone | |||
| 18175 | M | M.EalKF1ORF1163P (100% identity) | CCWGG | M.EalEA04ORF18175P |
| 18180 | R | EalLWGAORF18350P (100% identity) | CCWGG | EalEA04ORF18175P |
| 18185 | flagellar biosynthesis anti-sigma factor FlgM | |||
| plasmid pEA04.1 | ||||
| 23575 | thermonuclease family protein | |||
| 23580 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EalEA04ORF23580P |
| 23585 | 55 aa hypothetical protein | |||
| 23900 | DNA-binding protein | |||
| 23905 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EalEA04ORF23905P |
| 23910 | 284 aa hypothetical protein | |||
| plasmid pEA04.2 | ||||
| 24510 | 73 aa hypothetical protein | |||
| 24515 | M | M.Xca80ORFEP (100% identity) | M.EalEA04ORF24515P | |
| 24520 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pEA04.2 | ||||
| 24580 | mobilization protein MobX | |||
| 24585 | R | SspS13ORF650P (100% identity) | EalEA04ORF24590P | |
| 24590 | M | M.SspS13ORF650P (100% identity) | M.EalEA04ORF24590P | |
| 24595 | 67 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8575 | tyrosine-type recombinase/integrase | |||
| ??? | R | EcoPSJ14ORF16010P (87% identity) | EalEA04ORFAP | |
| 8580 | 27 aa hypothetical protein | |||
| 19825 | endoribonuclease SymE | |||
| 19830 | R | EalTBGAGmrSDP (55% identity) | EalEA04GmrSDBP | |
| 19835 | R | EalTBGAGmrSDP (42% identity) | EalEA04GmrSDAP | |
| 19840 | GntR family transcriptional regulator | |||
| 20075 | type I restriction-modification system subunit | |||
| 20080 | R | Eal47McrBP (100% identity) | EalEA04McrBP | |
| 20085 | R | EalLWGAMcrCP (100% identity) | EalEA04McrCP | |
| 20090 | IS66-like element ISEc8 family transposase | |||