Escherichia fergusonii 18B006LT |
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Putative Escherichia fergusonii 18B006LT RM systems
Ref: Kakita,T. et al. unpublished
REBASE ref # 37455
| Sequence length: | GenBank #: | |
| Chromosome: | 4,577,588 bp | AP028810 |
| plasmid p18B006LT2: | 92,264 bp | AP028812 |
REBASE acronym: EfeT
Org_num: 71413
All begin Ef18B006LT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 35530 | Fic family protein | |||
| 35540 | R | Efe38C01ORF18815P (100% identity) | EfeTORF35550P | |
| 35550 | M | M.Eco1105ORF21915P (99% identity) | M.EfeTORF35550P | |
| 35560 | S | S.PmaPB70ORF953P (77% identity) | S.EfeTORF35550P | |
| 35570 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2200 | bifunctional isocitrate dehydrogenase | |||
| 2210 | M | M.EfeIII (97% identity) | CCWGG | M.EfeTORF2210P |
| 2220 | glyoxylate bypass operon transcriptional | |||
| 14800 | TraR/DksA family transcriptional regulator | |||
| 14810 | M | M.EcoSTEC648ORF17135P (100% identity) | GATC | M.EfeTORF14810P |
| 14820 | replication endonuclease | |||
| 32350 | YqaJ viral recombinase family protein | |||
| 32360 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EfeTORF32360P |
| 32370 | DUF4222 domain-containing protein | |||
| 35730 | AAA family ATPase | |||
| 35740 | RM | EcoX143ORF23625P (100% identity) | EfeTORF35740P | |
| 35750 | BREX system P-loop protein BrxC | |||
| 37030 | DNA-binding transcriptional regulator Fis | |||
| 37040 | M | M.EfeLTORF5530P (100% identity) | ATGCAT | M.EfeTORF37040P |
| 37050 | DUF2556 family protein | |||
| 38010 | ribulose-phosphate 3-epimerase | |||
| 38020 | M | M.EfeEF91DamP (100% identity) | GATC | M.EfeTDamP |
| 38030 | cell division protein DamX | |||
| plasmid p18B006LT2 | ||||
| 43780 | DUF1281 domain-containing protein | |||
| 43790 | M | M.SspPIBORF23080P (100% identity) | M.EfeTORF43790P | |
| 43800 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 35570 | endoribonuclease SymE | |||
| 35580 | R | EfeMcrBP (100% identity) | EfeTMcrBP | |
| 35590 | R | Efe38C01McrCP (99% identity) | EfeTMcrCP | |