Escherichia coli GABEEC10 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli GABEEC10 RM systems
Ref: McDonagh,F. et al. unpublished
REBASE ref # 37452
| Sequence length: | GenBank #: | |
| Chromosome: | 4,940,530 bp | CP118407 |
| plasmid pGABEEC10_1: | 93,036 bp | CP118408 |
REBASE acronym: EcoEEC10
Org_num: 71405
All begin PVF01_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEEC10DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoEEC10ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 14770 | drug/metabolite exporter YedA | |||
| 14775 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEEC10DcmP |
| 14780 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoEEC10DcmP |
| 14785 | phosphohydrolase | |||
| 20375 | HNH endonuclease | |||
| 20380 | R | Ecoi127aORF4076P (100% identity) | EcoEEC10ORF20380P | |
| 20385 | peptidase | |||
| 20520 | 193 aa hypothetical protein | |||
| 20525 | R | Kpn173ORF23655P (100% identity) | CYCGRG | EcoEEC10ORF20530P |
| 20530 | M | M.Kpn173ORF23655P (100% identity) | CYCGRG | M.EcoEEC10ORF20530P |
| 20535 | tyrosine-type recombinase/integrase | |||
| plasmid pGABEEC10_1 | ||||
| 23770 | 103 aa hypothetical protein | |||
| 23775 | M | M.SspPIBORF23080P (100% identity) | M.EcoEEC10ORF23775P | |
| 23780 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20210 | endoribonuclease SymE | |||
| 20215 | R | EcoUTGmrSD2P (52% identity) | EcoEEC10GmrSDP | |
| 20220 | DUF262 domain-containing protein | |||