Escherichia coli CUVET21-1780 |
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Putative Escherichia coli CUVET21-1780 RM systems
Ref: Sroithongkham,P. et al. unpublished
REBASE ref # 37451
Complete sequence: 5,119,320 bp
GenBank #: CP115342
REBASE acronym: Eco1780
Org_num: 71402
All begin PCS81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10010 | IS3 family transposase | |||
| 10015 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco1780ORF10015P |
| 10020 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco1780ORF10015P |
| 10025 | YecA family protein | |||
| 10030 | cold shock domain-containing protein | |||
| 10035 | R | Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | Eco1780ORF10015P |
| 10040 | SprT family zinc-dependent metalloprotease | |||
| 15030 | transcription factor | |||
| 15035 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Eco1780ORF15035P |
| 15040 | S | S.Ecos2020ORFCP (100% identity) | YTCANNNNNNGTTY | S1.Eco1780ORF15035P |
| 15045 | DUF4433 domain-containing protein | |||
| 15050 | macro domain-containing protein | |||
| 15055 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | Eco1780ORF15035P |
| 15060 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2355 | DUF2556 family protein | |||
| 2360 | M | M.Ecoppa2ORF6235P (100% identity) | ATGCAT | M.Eco1780ORF2360P |
| 2365 | DNA-binding transcriptional regulator Fis | |||
| 9755 | phosphohydrolase | |||
| 9760 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.Eco1780DcmP |
| 9765 | V | V.Ecoppa2DcmP (100% identity) | V.Eco1780DcmP | |
| 9770 | drug/metabolite exporter YedA | |||
| 21090 | HNH endonuclease | |||
| 21095 | R | EcoZ151ORF20895P (100% identity) | Eco1780ORF21095P | |
| 21100 | McrC family protein | |||
| 21935 | integrase | |||
| 21940 | R | SflFF24DptFP (100% identity) | Eco1780DptFP | |
| 21945 | DNA phosphorothioation-dependent restriction | |||
| 21940 | DNA phosphorothioation-dependent restriction | |||
| 21945 | R | SflFF24DptGP (100% identity) | Eco1780DptGP | |
| 21950 | DNA phosphorothioation-dependent restriction | |||
| 21945 | DNA phosphorothioation-dependent restriction | |||
| 21950 | R | EcosEC5DptHP (100% identity) | Eco1780DptHP | |
| 21955 | accessory gene regulator B family protein | |||
| 21965 | DGQHR domain-containing protein | |||
| 21970 | M | M.SflFF24DndEP (100% identity) | M.Eco1780DndEP | |
| 21975 | DNA sulfur modification protein DndD | |||
| 21970 | DNA sulfur modification protein DndE | |||
| 21975 | M | M.SflFF24DndDP (100% identity) | M.Eco1780DndDP | |
| 21980 | DNA phosphorothioation system sulfurtransferase | |||
| 21975 | DNA sulfur modification protein DndD | |||
| 21980 | M | M.SflFF24DndCP (100% identity) | M.Eco1780DndCP | |
| 21985 | DNA sulfur modification protein DndB | |||
| 21980 | DNA phosphorothioation system sulfurtransferase | |||
| 21985 | M | M.SflFF24DndBP (100% identity) | M.Eco1780DndBP | |
| 21990 | osmoprotectant transport activator ProQ | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21095 | HNH endonuclease | |||
| 21100 | R | EcoZ151McrCP (100% identity) | Eco1780McrCP | |
| 21105 | R | EcoZ151McrBP (100% identity) | Eco1780McrBP | |
| 21110 | IS3-like element IS3 family transposase | |||