Escherichia coli CUVET17-1010 |
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Putative Escherichia coli CUVET17-1010 RM systems
Ref: Sroithongkham,P. et al. unpublished
REBASE ref # 37451
| Sequence length: | GenBank #: | |
| Chromosome: | 5,353,451 bp | CP115326 |
| plasmid pCUVET17-1010.1: | 134,505 bp | CP115327 |
| plasmid pCUVET17-1010.2: | 93,950 bp | CP115328 |
REBASE acronym: Eco010
Org_num: 71390
All begin PCS97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4585 | transposase | |||
| 4590 | R | Ecoi012ORF18325P (100% identity) | Eco010ORF4595P | |
| 4595 | M | M.EcosEC2ORF410P (100% identity) | M.Eco010ORF4595P | |
| 4600 | S | S.EcosC41ORF22705P (67% identity) | S1.Eco010ORF4595P | |
| 4605 | S | S.SspZ54ORF5015P (26% identity) | S2.Eco010ORF4595P | |
| 4610 | AAA family ATPase | |||
| 10595 | IS3 family transposase | |||
| 10600 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco010ORF10600P |
| 10605 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco010ORF10600P |
| 10610 | YecA family protein | |||
| 10615 | cold shock domain-containing protein | |||
| 10620 | cold-shock protein | |||
| 10625 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco010ORF10600P |
| 10630 | SprT family zinc-dependent metalloprotease | |||
| 21170 | adenine/cytosine-specific restriction | |||
| 21175 | R | Ecoo241ORF21620P (99% identity) | AACNNNNNNGTGC | Eco010ORF21180P |
| 21180 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco010ORF21180P |
| 21185 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco010ORF21180P |
| 21190 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco010DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco010ORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 10335 | phosphohydrolase | |||
| 10340 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco010DcmP |
| 10345 | V | V.Ecos142DcmP (100% identity) | V.Eco010DcmP | |
| 10350 | drug/metabolite exporter YedA | |||
| 16625 | replication endonuclease | |||
| 16630 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco010ORF16630P |
| 16635 | TraR/DksA family transcriptional regulator | |||
| 22885 | 40 aa hypothetical protein | |||
| 22890 | R | EcosS3ORF15775P (94% identity) | Eco010ORF22895P | |
| 22895 | M | M.EcosS3ORF15775P (99% identity) | M.Eco010ORF22895P | |
| 22900 | conjugal transfer protein TraG N-terminal | |||
| 23790 | phage lysis protein EssD | |||
| 23795 | M | M.Sso63633ORF22290P (100% identity) | M.Eco010ORF23795P | |
| 23800 | 67 aa hypothetical protein | |||
| 23830 | LexA family transcriptional regulator | |||
| 23835 | M | M.Sso90ORF15820P (99% identity) | GATC | M.Eco010ORF23835P |
| 23840 | PerC family transcriptional regulator | |||
| plasmid pCUVET17-1010.1 | ||||
| 26570 | 73 aa hypothetical protein | |||
| 26575 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco010ORF26575P |
| 26580 | 103 aa hypothetical protein | |||
| plasmid pCUVET17-1010.2 | ||||
| 26895 | SPFH domain-containing protein | |||
| 26915 | M | M.Ecos119ORF25785P (99% identity) | M.Eco010ORF26915P | |
| 26920 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21165 | GTPase | |||
| 21170 | R | Ssp28760MrrP (100% identity) | Eco010MrrP | |
| 21175 | type I restriction-modification system | |||
| 21190 | endoribonuclease SymE | |||
| 21195 | R | SenHNK130McrBP (100% identity) | Eco010McrBP | |
| 21200 | R | SenHNK130McrCP (100% identity) | Eco010McrCP | |