Lactobacillus helsingborgensis K-FP18 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus helsingborgensis K-FP18 RM systems
Ref: Kwong,W.K. et al. unpublished
REBASE ref # 37342
Complete sequence: 1,929,403 bp
GenBank #: CP132379
REBASE acronym: Lhe1
Org_num: 70932
All begin RAM07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3035 | 75 aa hypothetical protein | |||
| 3040 | M | M.LheH002ORF2705P (98% identity) | M.Lhe1ORF3040P | |
| 3045 | S | S1.Lga9ORF3030P (39% identity) | S1.Lhe1ORF3040P | |
| 3050 | tyrosine-type recombinase/integrase | |||
| ??? | S | S1.LspH004ORF8220P (49% identity) | S2.Lhe1ORF3040P | |
| 3060 | R | LheH002ORF2705P (98% identity) | Lhe1ORF3040P | |
| 3065 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2990 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 2995 | M | M.Phi55142ORF6085P (64% identity) | M.Lhe1ORF2995P | |
| 3000 | 331 aa hypothetical protein | |||
| 3005 | R | LmoLM30ORF2410BP (59% identity) | R1.Lhe1ORF2995P | |
| 3010 | R | Phi55142ORF6070P (39% identity) | R2.Lhe1ORF2995P | |
| 3015 | 175 aa hypothetical protein | |||
| 3980 | 102 aa hypothetical protein | |||
| 3985 | M | M.Aku1202ORF980P (63% identity) | M.Lhe1ORF3985P | |
| 3990 | 201 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 620 | exodeoxyribonuclease III | |||
| 625 | R | LheH002ORF485P (98% identity) | Lhe1ORF625P | |
| 630 | 83 aa hypothetical protein | |||
| 3060 | type I restriction endonuclease subunit R | |||
| 3065 | R | LheH003MrrP (99% identity) | Lhe1MrrP | |
| 3070 | YbaK/EbsC family protein | |||