Escherichia coli S7 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli S7 RM systems
Ref: Jaen-Luchoro,D. et al. Microorganisms 11 (7), 1622 (2023)
REBASE ref # 37298
| Sequence length: | GenBank #: | |
| Chromosome: | 5,247,286 bp | CP107128 |
| plasmid pS7-S3K40-1: | 123,735 bp | CP107129 |
REBASE acronym: EcoS7
Org_num: 69879
All begin OGM49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2915 | endoribonuclease SymE | |||
| 2920 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS7ORF2930P |
| 2925 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS7ORF2930P |
| 2930 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS7ORF2930P |
| 2935 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2570 | helix-turn-helix domain-containing protein | |||
| 2575 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS7ORF2575P |
| 2580 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS7ORF2575P |
| 2585 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS7ORF2575P |
| 2590 | McrC family protein | |||
| 4730 | tyrosine-type recombinase/integrase | |||
| 4735 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.EcoS7ORF4735P |
| 4740 | zinc ribbon domain-containing protein | |||
| 8450 | 71 aa hypothetical protein | |||
| 8455 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS7ORF8455P | |
| 8460 | helix-turn-helix domain-containing protein | |||
| 10870 | TrmB family transcriptional regulator | |||
| 10875 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS7ORF10875P |
| 10890 | DUF3927 family protein | |||
| 14420 | drug/metabolite exporter YedA | |||
| 14425 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS7DcmP |
| 14430 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS7DcmP |
| 14435 | phosphohydrolase | |||
| 16050 | helix-turn-helix domain-containing protein | |||
| 16055 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoS7ORF16055P | |
| 16060 | 71 aa hypothetical protein | |||
| 22130 | DNA-binding transcriptional regulator Fis | |||
| 22135 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS7ORF22135P |
| 22140 | DUF2556 family protein | |||
| 22730 | ribulose-phosphate 3-epimerase | |||
| 22735 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS7DamP |
| 22740 | cell division protein DamX | |||
| plasmid pS7-S3K40-1 | ||||
| 26355 | 103 aa hypothetical protein | |||
| 26360 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS7ORF26360P |
| 26365 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2585 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 2590 | R | EcosS9McrCP (100% identity) | EcoS7McrCP | |
| 2595 | R | EcosS3McrBP (100% identity) | EcoS7McrBP | |
| 2600 | glycosyltransferase | |||
| 2930 | type I restriction-modification system subunit | |||
| 2935 | R | Ecou021MrrP (100% identity) | EcoS7MrrP | |
| 2940 | BrnT family toxin | |||