Escherichia coli R14 |
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Putative Escherichia coli R14 RM systems
Ref: Jaen-Luchoro,D. et al. Microorganisms 11 (7), 1622 (2023)
REBASE ref # 37298
| Sequence length: | GenBank #: | |
| Chromosome: | 5,230,650 bp | CP107147 |
| plasmid pR14-S7K7-1: | 139,792 bp | CP107148 |
| plasmid pR14-S7K7-2: | 57,907 bp | CP107149 |
REBASE acronym: EcosR14
Org_num: 69863
All begin OGM43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17975 | endoribonuclease SymE | |||
| 17980 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcosR14ORF17990P |
| 17985 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcosR14ORF17990P |
| 17990 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcosR14ORF17990P |
| 17995 | restriction endonuclease | |||
| 19890 | ash family protein | |||
| 19895 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcosR14ORF19900P |
| 19900 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcosR14ORF19900P |
| 19905 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcosR14ORF19900P |
| 19910 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2905 | sialate O-acetylesterase | |||
| 2910 | M | M1.EcosS3ORF2905P (100% identity) | M1.EcosR14ORF2910P | |
| 2915 | TrmB family transcriptional regulator | |||
| 2920 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcosR14ORF2910P |
| 2925 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcosR14ORF2910P |
| 2930 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M2.EcosR14ORF2910P |
| 2935 | antiterminator Q family protein | |||
| 3805 | drug/metabolite exporter YedA | |||
| 3810 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcosR14DcmP |
| 3815 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcosR14DcmP |
| 3820 | phosphohydrolase | |||
| 7310 | 121 aa hypothetical protein | |||
| 7315 | R | Sso8033ORF3755P (100% identity) | CCWGG | EcosR14ORF7320P |
| 7320 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcosR14ORF7320P |
| 7325 | 257 aa hypothetical protein | |||
| 7450 | phage lysis protein EssD | |||
| 7455 | M | M.EcosR6ORF7985P (100% identity) | M.EcosR14ORF7455P | |
| 7460 | 95 aa hypothetical protein | |||
| 7495 | LexA family transcriptional regulator | |||
| 7500 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcosR14ORF7500P |
| 7505 | PerC family transcriptional regulator | |||
| 11280 | DNA-binding transcriptional regulator Fis | |||
| 11285 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcosR14ORF11285P |
| 11290 | DUF2556 family protein | |||
| 11880 | ribulose-phosphate 3-epimerase | |||
| 11885 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosR14DamP |
| 11890 | cell division protein DamX | |||
| 17630 | helix-turn-helix domain-containing protein | |||
| 17635 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcosR14ORF17635P |
| 17640 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcosR14ORF17635P |
| 17645 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcosR14ORF17635P |
| 17650 | McrC family protein | |||
| 23390 | 71 aa hypothetical protein | |||
| 23395 | M | M.KpnYN1ORFGP (89% identity) | M.EcosR14ORF23395P | |
| 23400 | helix-turn-helix domain-containing protein | |||
| 25670 | TrmB family transcriptional regulator | |||
| 25675 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcosR14ORF25675P |
| 25690 | DUF3927 family protein | |||
| plasmid pR14-S7K7-1 | ||||
| 26505 | 73 aa hypothetical protein | |||
| 26510 | M | M.KpnVA569ORF28145P (100% identity) | M.EcosR14ORF26510P | |
| 26515 | 103 aa hypothetical protein | |||
| plasmid pR14-S7K7-2 | ||||
| 26675 | recombinase family protein | |||
| 26680 | R | Sen23701ORF24490P (100% identity) | CCWGG | EcosR14ORF26685P |
| 26685 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcosR14ORF26685P |
| 26690 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17645 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17650 | R | EcosS9McrCP (100% identity) | EcosR14McrCP | |
| 17655 | R | EcosS3McrBP (100% identity) | EcosR14McrBP | |
| 17660 | glycosyltransferase | |||
| 17990 | type I restriction-modification system subunit | |||
| 17995 | R | Ecou021MrrP (100% identity) | EcosR14MrrP | |
| 18000 | BrnT family toxin | |||