Halomonas alkalicola CICC 11012s |
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Putative Halomonas alkalicola CICC 11012s RM systems
Ref: Zhai,L. unpublished
REBASE ref # 37280
Complete sequence: 3,611,010 bp
GenBank #: CP131913
REBASE acronym: Hal12s
Org_num: 69760
All begin B6N23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6260 | 90 aa hypothetical protein | |||
| 6265 | R | Hch83ORF3458P (91% identity) | Hal12sORF6290P | |
| 6270 | DUF3800 domain-containing protein | |||
| 6275 | GIY-YIG nuclease family protein | |||
| 6280 | Fic family protein | |||
| 6285 | S | S.HspPGE1ORF5940P (62% identity) | S.Hal12sORF6290P | |
| 6290 | M | M.HspPGE1ORF5940P (96% identity) | M.Hal12sORF6290P | |
| 6300 | 212 aa hypothetical protein | |||
| 8465 | 144 aa hypothetical protein | |||
| 8470 | S | S3.Kae872ORF21925P (41% identity) | S5.Hal12sORF8505P | |
| 8475 | R | HspPGE1ORF3175P (98% identity) | Hal12sORF8505P | |
| 8480 | 151 aa hypothetical protein | |||
| 8485 | AAA family ATPase | |||
| 8490 | S | S.Pal10367I (40% identity) | S4.Hal12sORF8505P | |
| 8495 | S | S2.HspPGE1ORF3175P (87% identity) | S3.Hal12sORF8505P | |
| 8500 | S | S1.HspPGE1ORF3175P (100% identity) | S1.Hal12sORF8505P | |
| 8505 | M | M.HspY3ORFBP (99% identity) | M.Hal12sORF8505P | |
| 8510 | S | S1.PsaLF89ORF2160P (27% identity) | S2.Hal12sORF8505P | |
| 8515 | YjiH family protein | |||
| 10180 | guanylate kinase | |||
| 10185 | R | HalM2ORFAP (94% identity) | Hal12sORF10195P | |
| 10190 | S | S.Pag976ORF65P (37% identity) | S.Hal12sORF10195P | |
| 10195 | M | M.HalM2ORFAP (98% identity) | M.Hal12sORF10195P | |
| 10200 | restriction endonuclease | |||
| 13990 | catabolite repressor/activator | |||
| 13995 | M | M.TpaPH27AORF905P (81% identity) | M.Hal12sORF13995P | |
| 14000 | S | S.HspSL7ORF770P (44% identity) | S.Hal12sORF13995P | |
| 14005 | virulence protein RhuM/Fic/DOC family protein | |||
| 14010 | R | HspSG2L4ORF500P (85% identity) | Hal12sORF13995P | |
| 14015 | carbohydrate kinase | |||
| 15125 | indole-3-glycerol phosphate synthase TrpC | |||
| 15130 | M | M.HspPGE1ORF14225P (96% identity) | M.Hal12sORF15130P | |
| 15135 | S | S.TpaARh1ORF7200P (58% identity) | S1.Hal12sORF15130P | |
| 15140 | S | S1.HspL1ORF19490P (69% identity) | S2.Hal12sORF15130P | |
| 15145 | R | HspPGE1ORF14225P (98% identity) | Hal12sORF15130P | |
| 15150 | S | S2.Psp607ORF26660P (71% identity) | S3.Hal12sORF15130P | |
| 15155 | phosphoribosyl-AMP cyclohydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1285 | IS1182 family transposase | |||
| 1290 | RM | VcuS5ORF13120P (57% identity) | Hal12sORF1290P | |
| 1295 | 420 aa hypothetical protein | |||
| 1435 | 242 aa hypothetical protein | |||
| 1440 | RM | PbaE1086ORF6240P (26% identity) | Hal12sORF1440AP | |
| 1445 | IS110 family transposase | |||
| 1450 | RM | Hne5ORF16635P (34% identity) | Hal12sORF1440BP | |
| 1455 | DEAD/DEAH box helicase | |||
| 10640 | DNA-processing protein DprA | |||
| 10645 | RM | Hme43005ORF16800P (29% identity) | Hal12sORF10645AP | |
| 10650 | IS1380 family transposase | |||
| 10655 | RM | Hmeme2ORF23670P (35% identity) | Hal12sORF10645BP | |
| 10660 | RNA-directed DNA polymerase | |||
| 10665 | 94 aa hypothetical protein | |||
| 10670 | RM | PmaJH7ORF8500P (28% identity) | Hal12sORF10645CP | |
| 10675 | DUF262 domain-containing protein | |||
| 12720 | glutamine-hydrolyzing GMP synthase | |||
| 12725 | M | M.EspBSL9ORF2026P (24% identity) | M.Hal12sORF12725AP | |
| 12730 | IS1380 family transposase | |||
| 12735 | M | M.EspBSL9ORF2026P (55% identity) | M.Hal12sORF12725BP | |
| 12740 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1300 | AAA domain-containing protein | |||
| 1305 | R | HsmAAD6McrBP (89% identity) | Hal12sMcrBP | |
| 1310 | R | HsmAAD6McrCP (76% identity) | Hal12sMcrCP | |
| 1315 | IS21-like element helper ATPase IstB | |||