Escherichia coli YZMc10-2 |
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Putative Escherichia coli YZMc10-2 RM systems
Ref: Yin,Y. unpublished
REBASE ref # 34560
| Sequence length: | GenBank #: | |
| Chromosome: | 4,839,687 bp | CP123247 |
| plasmid pYZMc10-2_113k: | 113,273 bp | CP123249 |
| plasmid pYZMc10-2_NDM-5_245k: | 245,805 bp | CP123248 |
REBASE acronym: EcoMc102
Org_num: 69596
All begin N4683_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19905 | 128 aa hypothetical protein | |||
| 19910 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.EcoMc102ORF19910P |
| 19915 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.EcoMc102ORF19910P |
| 19920 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1980 | cell division protein DamX | |||
| 1985 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMc102DamP |
| 1990 | ribulose-phosphate 3-epimerase | |||
| 2535 | DUF2556 family protein | |||
| 2540 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoMc102ORF2540P |
| 2545 | DNA-binding transcriptional regulator Fis | |||
| 4200 | phospholipase D-like domain-containing protein | |||
| 4205 | M | M.PmiCZP44ORF11275P (100% identity) | M.EcoMc102ORF4205P | |
| 4210 | DUF3780 and DUF4357 domain-containing protein | |||
| 9440 | phosphohydrolase | |||
| 9445 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.EcoMc102DcmP |
| 9450 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMc102DcmP |
| 9455 | drug/metabolite exporter YedA | |||
| 19885 | HNH endonuclease | |||
| 19890 | R | EcosC41ORF5230P (100% identity) | EcoMc102ORF19890P | |
| 19895 | AAA family ATPase | |||
| plasmid pYZMc10-2_113k | ||||
| 24855 | 103 aa hypothetical protein | |||
| 24860 | M | M.Eco9272ORFIP (100% identity) | M.EcoMc102ORF24860P | |
| 24865 | 73 aa hypothetical protein | |||
| plasmid pYZMc10-2_NDM-5_245k | ||||
| 24035 | 55 aa hypothetical protein | |||
| 24040 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoMc102ORF24040P |
| 24045 | thermonuclease family protein | |||
| 24455 | 48 aa hypothetical protein | |||
| 24460 | M | M.YpsF1ORFBP (100% identity) | M.EcoMc102ORF24460P | |
| 24465 | 202 aa hypothetical protein | |||
| 24575 | DNA-binding protein | |||
| 24580 | M | M.YpsF1ORFDP (95% identity) | M.EcoMc102ORF24580P | |
| 24585 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4190 | transposase | |||
| 4195 | R | PmiCZP44MrrP (100% identity) | EcoMc102MrrP | |
| 4200 | phospholipase D-like domain-containing protein | |||
| 19890 | HNH endonuclease | |||
| 19895 | R | Eco8RMcrBP (99% identity) | EcoMc102McrBP | |
| 19900 | R | Ecows53McrCP (100% identity) | EcoMc102McrCP | |
| 19905 | 128 aa hypothetical protein | |||