Escherichia coli PNUSAE013245 |
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Putative Escherichia coli PNUSAE013245 RM systems
Ref: Carter,M.Q. et al. unpublished
REBASE ref # 37245
| Sequence length: | GenBank #: | |
| Chromosome: | 5,557,287 bp | CP126906 |
| plasmid pPNUSAE013245-1: | 94,623 bp | CP126907 |
REBASE acronym: Eco245
Org_num: 69593
All begin DDA95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24710 | DUF262 domain-containing protein | |||
| 24715 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco245ORF24720P |
| 24720 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco245ORF24720P |
| 24725 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco245ORF24720P |
| 24730 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2305 | cell division protein DamX | |||
| 2310 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco245DamP |
| 2315 | ribulose-phosphate 3-epimerase | |||
| 2825 | DUF2556 family protein | |||
| 2830 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco245ORF2830P |
| 2835 | DNA-binding transcriptional regulator Fis | |||
| 7980 | DUF1382 family protein | |||
| 7985 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco245ORF7985P |
| 7990 | 55 aa hypothetical protein | |||
| 8165 | NUMOD4 domain-containing protein | |||
| 8170 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco245ORF8170P |
| 8175 | NinE family protein | |||
| 10875 | recombination protein NinB | |||
| 10880 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco245ORF10880P |
| 10885 | NinE family protein | |||
| 11700 | phosphohydrolase | |||
| 11705 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco245DcmP |
| 11710 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco245DcmP |
| 11715 | drug/metabolite exporter YedA | |||
| 16015 | DUF1737 domain-containing protein | |||
| 16030 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco245ORF16030P | |
| 16035 | TrmB family transcriptional regulator | |||
| 24950 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco245ORF24950P |
| 24955 | DEAD/DEAH box helicase | |||
| 24985 | N-acetylneuraminic acid mutarotase | |||
| 24990 | R | EcosPA8ORF17350P (100% identity) | Eco245ORF24990P | |
| 24995 | transposase | |||
| 26220 | Eae protein | |||
| 26225 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco245ORF26225P | |
| 26230 | 65 aa hypothetical protein | |||
| plasmid pPNUSAE013245-1 | ||||
| 28190 | 101 aa hypothetical protein | |||
| 28195 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco245ORF28195P | |
| 28200 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24730 | endoribonuclease SymE | |||
| 24735 | R | EcosPA8GmrSDP (55% identity) | Eco245GmrDP | |
| 24740 | R | Ecos1613GmrSP (100% identity) | Eco245GmrSP | |
| 24745 | cytoplasmic protein | |||