Escherichia coli MS15046 |
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Putative Escherichia coli MS15046 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
| Sequence length: | GenBank #: | |
| Chromosome: | 5,217,608 bp | CP082103 |
| plasmid pMS15046A: | 137,906 bp | CP082104 |
| plasmid pMS15046B: | 91,472 bp | CP082105 |
REBASE acronym: Eco15046
Org_num: 69575
All begin K6124_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24675 | endoribonuclease SymE | |||
| 24680 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco15046ORF24685P |
| 24685 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco15046ORF24685P |
| 24690 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco15046ORF24685P |
| 24695 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | tyrosine-type recombinase/integrase | |||
| 1700 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco15046ORF1700P |
| 1705 | zinc ribbon domain-containing protein | |||
| 6850 | recombination protein NinB | |||
| 6855 | M | M.EcoUS29ORF13960P (100% identity) | GATC | M.Eco15046ORF6855P |
| 6860 | NinE family protein | |||
| 10870 | drug/metabolite exporter YedA | |||
| 10875 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco15046DcmP |
| 10880 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco15046DcmP |
| 10885 | phosphohydrolase | |||
| 18405 | DNA-binding transcriptional regulator Fis | |||
| 18410 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco15046ORF18410P |
| 18415 | DUF2556 family protein | |||
| 19005 | ribulose-phosphate 3-epimerase | |||
| 19010 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco15046DamP |
| 19015 | cell division protein DamX | |||
| 24430 | ATP-binding protein | |||
| 24435 | M | M.EcoUS29ORF21080P (100% identity) | M.Eco15046ORF24435P | |
| 24440 | HigA family addiction module antidote protein | |||
| 24500 | 109 aa hypothetical protein | |||
| 24505 | R | EcoT073ORF21650P (100% identity) | Eco15046ORF24505P | |
| 24510 | HNH endonuclease | |||
| plasmid pMS15046A | ||||
| 25620 | 102 aa hypothetical protein | |||
| 25625 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco15046ORF25625P |
| 25630 | 73 aa hypothetical protein | |||
| plasmid pMS15046B | ||||
| 26010 | 73 aa hypothetical protein | |||
| 26015 | M | M.EcoREF1ORF26250P (100% identity) | M.Eco15046ORF26015P | |
| 26020 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24450 | integrase arm-type DNA-binding domain-containing | |||
| 24455 | R | EcoUTI89IP (100% identity) | CACAG | Eco15046ORF24460P |
| 24460 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco15046ORF24460P |
| 24465 | ATP-binding domain-containing protein | |||