Escherichia coli MS15236 |
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Putative Escherichia coli MS15236 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
| Sequence length: | GenBank #: | |
| Chromosome: | 5,017,332 bp | CP082094 |
| plasmid pMS15236A: | 125,677 bp | CP082095 |
| plasmid pMS15236B: | 83,519 bp | CP082096 |
REBASE acronym: Eco15236
Org_num: 69578
All begin K6135_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23305 | endoribonuclease SymE | |||
| 23310 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco15236ORF23315P |
| 23315 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco15236ORF23315P |
| 23320 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco15236ORF23315P |
| 23325 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17130 | DNA-binding transcriptional regulator Fis | |||
| 17135 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco15236ORF17135P |
| 17140 | DUF2556 family protein | |||
| 22380 | cell division protein DamX | |||
| 22385 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco15236DamP |
| 22390 | ribulose-phosphate 3-epimerase | |||
| 22850 | conjugal transfer protein TraG N-terminal | |||
| 22855 | M | M.EcosS3ORF15775P (100% identity) | M.Eco15236ORF22855P | |
| 22860 | R | EcosS3ORF15775P (100% identity) | Eco15236ORF22855P | |
| 22865 | 555 aa hypothetical protein | |||
| 23130 | 59 aa hypothetical protein | |||
| 23135 | R | Ecoi127aORF4076P (100% identity) | Eco15236ORF23135P | |
| 23140 | HNH endonuclease | |||
| 23545 | PerC family transcriptional regulator | |||
| 23550 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco15236ORF23550P |
| 23555 | LexA family transcriptional regulator | |||
| 23590 | 67 aa hypothetical protein | |||
| 23595 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco15236ORF23595P | |
| 23600 | phage holin, lambda family | |||
| plasmid pMS15236A | ||||
| 24175 | 103 aa hypothetical protein | |||
| 24180 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco15236ORF24180P |
| 24185 | 73 aa hypothetical protein | |||
| plasmid pMS15236B | ||||
| 24945 | 73 aa hypothetical protein | |||
| 24950 | M | M.Eco0147ORF26120P (99% identity) | M.Eco15236ORF24950P | |
| 24955 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23295 | 26 aa hypothetical protein | |||
| 23300 | R | EcoRb3GmrSDP (100% identity) | Eco15236GmrSDP | |
| 23305 | endoribonuclease SymE | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5860 | recombination protein NinB | |||
| 5865 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco15236ORF5865P |
| 5870 | NinE family protein | |||