Escherichia coli MS20645 |
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Putative Escherichia coli MS20645 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
Complete sequence: 5,249,827 bp
GenBank #: CP082091
REBASE acronym: Eco20645
Org_num: 69579
All begin K6132_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25220 | endoribonuclease SymE | |||
| 25225 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco20645ORF25230P |
| 25230 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco20645ORF25230P |
| 25235 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco20645ORF25230P |
| 25240 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7095 | TrmB family transcriptional regulator | |||
| 7100 | M | M.SflC32ORFBP (100% identity) | M.Eco20645ORF7100P | |
| 7120 | tellurite resistance protein | |||
| 10220 | class II holin family protein | |||
| 10240 | M | M.EcoUS12ORF13970P (100% identity) | A | M.Eco20645ORF10240P |
| 10245 | TrmB family transcriptional regulator | |||
| 10245 | TrmB family transcriptional regulator | |||
| 10250 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.Eco20645ORF10260P |
| 10255 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.Eco20645ORF10260P |
| 10260 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.Eco20645ORF10260P |
| 10265 | antitermination protein | |||
| 10900 | drug/metabolite exporter YedA | |||
| 10905 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco20645DcmP |
| 10910 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco20645DcmP |
| 10915 | phosphohydrolase | |||
| 14580 | PerC family transcriptional regulator | |||
| 14585 | M | M.Eco73ORF15695P (100% identity) | M.Eco20645ORF14585P | |
| 14590 | DUF1382 family protein | |||
| 18715 | DNA-binding transcriptional regulator Fis | |||
| 18720 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.Eco20645ORF18720P |
| 18725 | DUF2556 family protein | |||
| 19315 | ribulose-phosphate 3-epimerase | |||
| 19320 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco20645DamP |
| 19325 | cell division protein DamX | |||
| 22250 | DUF3850 domain-containing protein | |||
| 22255 | M | M.SflFF35ORF20P (100% identity) | GGCC | M.Eco20645ORF22255P |
| 22260 | 330 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25210 | 26 aa hypothetical protein | |||
| 25215 | R | Eho218GmrDP (100% identity) | Eco20645GmrSDP | |
| 25220 | endoribonuclease SymE | |||