Escherichia coli CE0026a |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli CE0026a RM systems
Ref: Burgess,S.A. et al. unpublished
REBASE ref # 37116
| Sequence length: | GenBank #: | |
| Chromosome: | 5,055,155 bp | CP119003 |
| plasmid pCE0026a1: | 135,958 bp | CP119004 |
REBASE acronym: Eco26a
Org_num: 68950
All begin PY719_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4125 | cell division protein DamX | |||
| 4130 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco26aDamP |
| 4135 | ribulose-phosphate 3-epimerase | |||
| 4750 | DUF2556 family protein | |||
| 4755 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco26aORF4755P |
| 4760 | DNA-binding transcriptional regulator Fis | |||
| 12260 | HD domain-containing protein | |||
| 12265 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco26aDcmP |
| 12270 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco26aDcmP |
| 12275 | drug/metabolite exporter YedA | |||
| plasmid pCE0026a1 | ||||
| 24490 | 73 aa hypothetical protein | |||
| 24495 | M | M.SenS318ORF60P (100% identity) | M.Eco26aORF24495P | |
| 24500 | 103 aa hypothetical protein | |||
| 24785 | IS6-like element IS26 family transposase | |||
| 24790 | R | Ubap201ORF4P (70% identity) | CCWGG | Eco26aORF24795P |
| 24795 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco26aORF24795P |
| 24800 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23830 | S8 family peptidase | |||
| 23835 | M | M.Eco07aORF5045P (100% identity) | ACCACC | M.Eco26aORF23835P |
| 23840 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco26aORF23835P |
| 23845 | LPS O-antigen chain length determinant protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22820 | GTPase | |||
| 22825 | R | Ssp28760MrrP (100% identity) | Eco26aMrrP | |
| 22830 | type I restriction-modification system | |||
| 22855 | endoribonuclease SymE | |||
| 22860 | R | Ssp28760McrBP (100% identity) | Eco26aMcrBP | |
| 22865 | R | Ssp28760McrCP (100% identity) | Eco26aMcrCP | |