Escherichia coli CE0021a |
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Putative Escherichia coli CE0021a RM systems
Ref: Burgess,S.A. et al. unpublished
REBASE ref # 37116
Complete sequence: 5,231,915 bp
GenBank #: CP119006
REBASE acronym: Eco21a
Org_num: 68949
All begin PY722_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19720 | SprT family zinc-dependent metalloprotease | |||
| 19725 | R | EcoTX1999ORF2159P (99% identity) | AGCANNNNNNNTAG | Eco21aORF19735P |
| 19730 | S | S.EcoTX1999ORF2159P (100% identity) | AGCANNNNNNNTAG | S.Eco21aORF19735P |
| 19735 | M | M.EcoSTEC346ORFGP (100% identity) | AGCANNNNNNNTAG | M.Eco21aORF19735P |
| 19740 | 380 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1675 | DNA-binding transcriptional regulator Fis | |||
| 1680 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco21aORF1680P |
| 1685 | DUF2556 family protein | |||
| 2315 | ribulose-phosphate 3-epimerase | |||
| 2320 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco21aDamP |
| 2325 | cell division protein DamX | |||
| 6305 | PerC family transcriptional regulator | |||
| 6310 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco21aORF6310P |
| 6315 | LexA family transcriptional regulator | |||
| 11120 | TrmB family transcriptional regulator | |||
| 11125 | M | M.EcosE1ORFAP (100% identity) | M.Eco21aORF11125P | |
| 11130 | class II holin family protein | |||
| 11310 | PerC family transcriptional regulator | |||
| 11315 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco21aORF11315P |
| 11320 | LexA family transcriptional regulator | |||
| 11345 | 67 aa hypothetical protein | |||
| 11350 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco21aORF11350P | |
| 11355 | phage holin, lambda family | |||
| 12830 | recombination protein NinB | |||
| 12835 | M | M.SflFF36ORF6645P (100% identity) | GATC | M.Eco21aORF12835P |
| 12840 | NinE family protein | |||
| 13470 | TraR/DksA family transcriptional regulator | |||
| 13475 | M | M.EcoR70ORF6410P (99% identity) | GATC | M.Eco21aORF13475P |
| 13480 | replication endonuclease | |||
| 17600 | 95 aa hypothetical protein | |||
| 17605 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco21aORF17605P | |
| 17610 | DUF977 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8025 | SNF2-related protein | |||
| 8030 | M | M.EcoR71ORF22205P (100% identity) | GWCCC | M.Eco21aORF8030P |
| 8035 | R | EcoSCU172ORF3240P (100% identity) | GWCCC | Eco21aORF8030P |
| 8040 | 100 aa hypothetical protein | |||