Ligilactobacillus ruminis SRCM218231 |
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Putative Ligilactobacillus ruminis SRCM218231 RM systems
Ref: Yang,H.-G. et al. unpublished
REBASE ref # 35221
Complete sequence: 2,181,862 bp
GenBank #: CP129341
REBASE acronym: Lru1
Org_num: 69172
All begin QYH55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4345 | nucleoside hydrolase | |||
| 4350 | R | Lru881ORF4120P (99% identity) | Lru1ORF4355P | |
| 4355 | M | M.Lru25644ORF6590P (99% identity) | M.Lru1ORF4355P | |
| 4360 | S | S.Lsa840ORF150P (43% identity) | S.Lru1ORF4355P | |
| 4365 | site-specific integrase | |||
| 4430 | site-specific integrase | |||
| 4435 | S | S.LbrM10ORF11955P (38% identity) | S.Lru1ORF4435P | |
| 4440 | DUF3013 family protein | |||
| 4955 | helix-turn-helix transcriptional regulator | |||
| 4960 | M | M.PmeBin501ORFBP (82% identity) | M.Lru1ORF4960P | |
| 4965 | S | S.Bob29174ORF1850P (72% identity) | S.Lru1ORF4960P | |
| 4970 | R | Gsp571GIIP (86% identity) | Lru1ORF4960P | |
| 4975 | AbiA family abortive infection protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2040 | 104 aa hypothetical protein | |||
| 2045 | RM | Era1105ORF16760P (79% identity) | Lru1ORF2045P | |
| 2050 | tyrosine-type recombinase/integrase | |||
| 4880 | 106 aa hypothetical protein | |||
| 4885 | M | M1.Lru881ORF4660P (90% identity) | M1.Lru1ORF4885P | |
| 4890 | M | M1.LdeLDBC1ORF5340P (45% identity) | M2.Lru1ORF4885P | |
| 4895 | RM | Lru881ORF4660P (99% identity) | Lru1ORF4885P | |
| 4900 | restriction endonuclease | |||
| 7215 | transposase | |||
| 7220 | V | V.Lga4ORF2900P (61% identity) | V.Lru1ORF7235P | |
| 7225 | IS21-like element helper ATPase IstB | |||
| 7230 | IS21 family transposase | |||
| 7235 | M | M.SspW6ORFCP (55% identity) | M.Lru1ORF7235P | |
| 7240 | alcohol dehydrogenase catalytic | |||
| 7465 | DUF262 domain-containing HNH endonuclease family | |||
| 7470 | RM | AkuB507JORF10220P (72% identity) | Lru1ORF7475P | |
| 7475 | M | M1.Lsa12574ORF1485P (69% identity) | M2.Lru1ORF7475P | |
| 7480 | M | M.Lsa51ORF7827P (64% identity) | M1.Lru1ORF7475P | |
| 7485 | transcription repressor NadR | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4895 | DEAD/DEAH box helicase family protein | |||
| 4900 | R | Ral7Mrr2P (78% identity) | Lru1Mrr2P | |
| 4905 | 31 aa hypothetical protein | |||