Escherichia coli GZM7 |
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Putative Escherichia coli GZM7 RM systems
Ref: Cui,J. and Yuan,L. unpublished
REBASE ref # 37117
| Sequence length: | GenBank #: | |
| Chromosome: | 4,789,193 bp | CP129279 |
| plasmid pGZM7b: | 132,619 bp | CP129281 |
| plasmid pGZM7c: | 100,759 bp | CP129282 |
| plasmid pGZM7d: | 90,008 bp | CP129283 |
| plasmid pGZM7e: | 76,863 bp | CP129284 |
REBASE acronym: EcoG2M7
Org_num: 68954
All begin QYN11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3965 | transposase | |||
| 3970 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoG2M7ORF3975P |
| 3975 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoG2M7ORF3975P |
| 3980 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoG2M7ORF3975P |
| 3985 | AAA family ATPase | |||
| 5800 | IS1 family transposase | |||
| 5805 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoG2M7ORF5815P |
| 5810 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoG2M7ORF5815P |
| 5815 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoG2M7ORF5815P |
| 5820 | integrase core domain-containing protein | |||
| plasmid pGZM7b | ||||
| 24535 | 3-phosphatase | |||
| 24540 | R | EcoLH09aORF24620P (100% identity) | EcoG2M7ORF24550P | |
| 24545 | S | S.EcoLH09aORF24620P (100% identity) | S.EcoG2M7ORF24550P | |
| 24550 | M | M.EcoLH09aORF24620P (100% identity) | M.EcoG2M7ORF24550P | |
| 24555 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoG2M7DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoG2M7ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 7970 | transcriptional regulator | |||
| 7975 | M | M.EcoVEV10FORF15720P (100% identity) | M.EcoG2M7ORF7975P | |
| 7980 | 89 aa hypothetical protein | |||
| 9410 | phosphohydrolase | |||
| 9415 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoG2M7DcmP |
| 9420 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoG2M7DcmP |
| 9425 | drug/metabolite exporter YedA | |||
| 14960 | 273 aa hypothetical protein | |||
| 14965 | M | M.EcoO78ORF7950P (100% identity) | GATC | M.EcoG2M7ORF14965P |
| 14970 | TraR/DksA family transcriptional regulator | |||
| 16695 | 67 aa hypothetical protein | |||
| 16700 | M | M.EcoNC22ORF10915P (100% identity) | M.EcoG2M7ORF16700P | |
| 16705 | 63 aa hypothetical protein | |||
| 19890 | McrC family protein | |||
| 19895 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoG2M7ORF19900P |
| 19900 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoG2M7ORF19900P |
| 19905 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoG2M7ORF19900P |
| 19910 | IS21-like element ISEc12 family helper ATPase | |||
| plasmid pGZM7b | ||||
| 24420 | recombination-associated protein RdgC | |||
| 24425 | M | M.EcoLIN13ORF24290P (100% identity) | M.EcoG2M7ORF24425P | |
| 24440 | tellurite/colicin resistance protein | |||
| plasmid pGZM7c | ||||
| 25290 | 103 aa hypothetical protein | |||
| 25295 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoG2M7ORF25295P |
| 25300 | 73 aa hypothetical protein | |||
| plasmid pGZM7d | ||||
| 25785 | 24 aa hypothetical protein | |||
| 25790 | M | M.EcoB122ORF2200P (100% identity) | M.EcoG2M7ORF25790P | |
| 25795 | 73 aa hypothetical protein | |||
| plasmid pGZM7e | ||||
| 26245 | 97 aa hypothetical protein | |||
| 26250 | M | M.Xca80ORFEP (100% identity) | M.EcoG2M7ORF26250P | |
| 26255 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8045 | recombinase family protein | |||
| 8050 | R | Ecochi7122GmrSDP (100% identity) | EcoG2M7GmrSDP | |
| 8055 | IS3-like element IS2 family transposase | |||