Escherichia coli VG38-53E1 |
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Putative Escherichia coli VG38-53E1 RM systems
Ref: Perreten,V. et al. unpublished
REBASE ref # 37120
Complete sequence: 5,299,837 bp
GenBank #: CP128578
REBASE acronym: Eco3E1
Org_num: 69010
All begin QUR98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22000 | restriction endonuclease | |||
| 22005 | M | M.EcosA4II (100% identity) | GATANNNNNNTCC | M.Eco3E1ORF22005P |
| 22010 | S | S.EcosA4II (100% identity) | GATANNNNNNTCC | S.Eco3E1ORF22005P |
| 22015 | R | EcoSCB11ORF13455P (100% identity) | GATANNNNNNTCC | Eco3E1ORF22005P |
| 22020 | endoribonuclease SymE | |||
| 22270 | DUF4942 domain-containing protein | |||
| 22275 | M | M.EcosA4I (100% identity) | GAGNNNNNNGTC | M.Eco3E1ORF22275P |
| 22280 | S | S.EcosA4I (100% identity) | GAGNNNNNNGTC | S.Eco3E1ORF22275P |
| 22285 | R | EcosA33IP (100% identity) | GAGNNNNNNGTC | Eco3E1ORF22275P |
| 22295 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | cell division protein DamX | |||
| 1690 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3E1DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco3E1ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 6890 | DUF1382 family protein | |||
| 6895 | M | M.EcoPYO2ORF17175P (100% identity) | M.Eco3E1ORF6895P | |
| 6900 | PerC family transcriptional regulator | |||
| 9075 | helix-turn-helix domain-containing protein | |||
| 9080 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco3E1ORF9080P | |
| 9085 | 71 aa hypothetical protein | |||
| 10720 | phosphohydrolase | |||
| 10725 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.Eco3E1DcmP |
| 10730 | V | V.EcosA4DcmP (100% identity) | V.Eco3E1DcmP | |
| 10735 | drug/metabolite exporter YedA | |||
| 16810 | replication endonuclease | |||
| 16815 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco3E1ORF16815P |
| 16820 | TraR/DksA family transcriptional regulator | |||
| 18470 | LexA family transcriptional regulator | |||
| 18475 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco3E1ORF18475P |
| 18480 | PerC family transcriptional regulator | |||
| 21770 | RusA family crossover junction | |||
| 21775 | M | M.EcoSCB11ORF17850P (100% identity) | GATC | M.Eco3E1ORF21775P |
| 21780 | PerC family transcriptional regulator | |||
| 22250 | HNH endonuclease | |||
| 22255 | R | EcosA4ORF22115P (100% identity) | Eco3E1ORF22255P | |
| 22260 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21995 | BrnT family toxin | |||
| 22000 | R | EcosA4MrrP (100% identity) | Eco3E1MrrP | |
| 22005 | class I SAM-dependent DNA methyltransferase | |||
| 22255 | HNH endonuclease | |||
| 22260 | R | EcoSCB11McrCP (100% identity) | Eco3E1McrCP | |
| 22265 | R | EcosA4McrBP (100% identity) | Eco3E1McrBP | |
| 22270 | DUF4942 domain-containing protein | |||