Escherichia coli T309.Ta3 |
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Putative Escherichia coli T309.Ta3 RM systems
Ref: Lai,G.K.K. et al. unpublished
REBASE ref # 35364
| Sequence length: | GenBank #: | |
| Chromosome: | 5,191,980 bp | CP128255 |
| plasmid pT309.Ta3_1: | 113,750 bp | CP128256 |
| plasmid pT309.Ta3_2: | 85,979 bp | CP128257 |
REBASE acronym: EcoTa3
Org_num: 68986
All begin QRX22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3685 | integrating conjugative element protein | |||
| 3690 | M | M.Mmo48659ORF2735P (99% identity) | M.EcoTa3ORF3690P | |
| 3695 | AAA family ATPase | |||
| 3700 | S | S.Mmo48659ORF2735P (99% identity) | S.EcoTa3ORF3690P | |
| 3705 | R | Mmo48659ORF2735P (99% identity) | EcoTa3ORF3690P | |
| 3710 | 72 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoTa3DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2420 | DUF2556 family protein | |||
| 2425 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoTa3ORF2425P |
| 2430 | DNA-binding transcriptional regulator Fis | |||
| 8610 | PerC family transcriptional regulator | |||
| 8615 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoTa3ORF8615P |
| 8620 | LexA family transcriptional regulator | |||
| 10570 | phosphohydrolase | |||
| 10575 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTa3DcmP |
| 10580 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoTa3DcmP |
| 10585 | drug/metabolite exporter YedA | |||
| 21880 | HNH endonuclease | |||
| 21885 | R | Eco941ORF11535P (100% identity) | EcoTa3ORF21885P | |
| 21890 | peptidase | |||
| plasmid pT309.Ta3_1 | ||||
| 25945 | tellurite/colicin resistance protein | |||
| 25960 | M | M.Sen9102ORF23126P (100% identity) | M.EcoTa3ORF25960P | |
| 25965 | recombination-associated protein RdgC | |||
| plasmid pT309.Ta3_2 | ||||
| 26160 | 103 aa hypothetical protein | |||
| 26165 | M | M.Sen1357ORF24335P (98% identity) | M.EcoTa3ORF26165P | |
| 26170 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21625 | 34 aa hypothetical protein | |||
| 21630 | R | EcoC0232MrrP (100% identity) | EcoTa3MrrP | |
| 21635 | type I restriction-modification system subunit M | |||