Escherichia coli TG1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli TG1 RM systems
Ref: Thota,S. et al. unpublished
REBASE ref # 37015
Complete sequence: 4,473,541 bp
GenBank #: CP128218
REBASE acronym: EcoTG1
Org_num: 68417
All begin QSI84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20345 | 5-methylcytosine-specific restriction | |||
| 20350 | R | Msa17ORFC2P (98% identity) | EcoTG1ORF20350P | |
| 20355 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8335 | drug/metabolite exporter YedA | |||
| 8340 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoTG1DcmP |
| 8345 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTG1DcmP |
| 8350 | phosphohydrolase | |||
| 14895 | DNA-binding transcriptional regulator Fis | |||
| 14900 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoTG1ORF14900P |
| 14905 | DUF2556 family protein | |||
| 15525 | ribulose-phosphate 3-epimerase | |||
| 15530 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTG1DamP |
| 15535 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4105 | site-specific DNA recombinase | |||
| 4110 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoTG1ORF4110P |
| 4115 | isocitrate/isopropylmalate family dehydrogenase | |||
| 20335 | 978 aa hypothetical protein | |||
| 20340 | R | SenHNK130McrCP (100% identity) | EcoTG1McrCP | |
| 20345 | 5-methylcytosine-specific restriction | |||
| 20350 | type I restriction-modification system | |||
| 20355 | R | SenHNK130MrrP (100% identity) | EcoTG1MrrP | |
| 20360 | GTPase | |||