Escherichia coli C51 |
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Putative Escherichia coli C51 RM systems
Ref: Mihailovskaya,V. et al. unpublished
REBASE ref # 36976
| Sequence length: | GenBank #: | |
| Chromosome: | 5,021,426 bp | CP127306 |
| plasmid pC5102: | 102,363 bp | CP127310 |
| plasmid pC5103: | 97,369 bp | CP127312 |
REBASE acronym: EcoC51
Org_num: 68207
All begin QRM70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3405 | adenine/cytosine-specific restriction | |||
| 3410 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoC51ORF3415P |
| 3415 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoC51ORF3415P |
| 3420 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoC51ORF3415P |
| 3425 | endoribonuclease SymE | |||
| 21280 | GTPase family protein | |||
| 21285 | M | M.Eco4090ORF17825P (100% identity) | M.EcoC51ORF21285P | |
| 21290 | S | S.EcoM70ORF22640P (99% identity) | S.EcoC51ORF21285P | |
| 21295 | AAA family ATPase | |||
| 21300 | R | Eco2252ORF1468P (99% identity) | EcoC51ORF21285P | |
| 21305 | 105 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8775 | cell division protein DamX | |||
| 8780 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC51DamP |
| 8785 | ribulose-phosphate 3-epimerase | |||
| 9330 | DUF2556 family protein | |||
| 9335 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC51ORF9335P |
| 9340 | DNA-binding transcriptional regulator Fis | |||
| 13245 | 126 aa hypothetical protein | |||
| 13250 | M | M.EcoM17ORF9780P (100% identity) | M.EcoC51ORF13250P | |
| 13255 | helix-turn-helix domain-containing protein | |||
| 15440 | 95 aa hypothetical protein | |||
| 15445 | M | M.SflSTLE1ORF5465P (100% identity) | M.EcoC51ORF15445P | |
| 15450 | phage holin, lambda family | |||
| 16845 | phosphohydrolase | |||
| 16850 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC51DcmP |
| 16855 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC51DcmP |
| 16860 | drug/metabolite exporter YedA | |||
| 22730 | replication endonuclease | |||
| 22735 | M | M.KpnTGH8ORF18000P (100% identity) | GATC | M.EcoC51ORF22735P |
| 22740 | DUF3850 domain-containing protein | |||
| plasmid pC5102 | ||||
| 25480 | 73 aa hypothetical protein | |||
| 25485 | M | M.Xca80ORFEP (47% identity) | M.EcoC51ORF25485P | |
| 25490 | IS21-like element ISEc12 family transposase | |||
| 25495 | IS21-like element ISEc12 family helper ATPase | |||
| 25500 | M | M.KpnVA569ORF28145P (52% identity) | M.EcoC51ORF25500P | |
| 25505 | 101 aa hypothetical protein | |||
| plasmid pC5103 | ||||
| 26740 | 97 aa hypothetical protein | |||
| 26745 | M | M.Xca80ORFEP (100% identity) | M.EcoC51ORF26745P | |
| 26750 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3400 | GTPase | |||
| 3405 | R | Ssp28760MrrP (100% identity) | EcoC51MrrP | |
| 3410 | type I restriction-modification system | |||
| 3425 | endoribonuclease SymE | |||
| 3430 | R | Ssp28760McrBP (100% identity) | EcoC51McrBP | |
| 3435 | R | Ssp28760McrCP (100% identity) | EcoC51McrCP | |