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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- FSIS12035116 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
Sequence length: | GenBank #: | |
Chromosome: | 5,016,958 bp | CP123674 |
plasmid pFSIS12035116-1: | 244,678 bp | CP123673 |
REBASE acronym: Sen5116
Org_num: 68246
All begin IR414_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21775 | restriction endonuclease | |||
21780 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5116ORF21785P |
21785 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen5116ORF21785P |
21790 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen5116ORF21785P |
21795 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3815 | DUF2556 family protein | |||
3820 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5116ORF3820P |
3825 | DNA-binding transcriptional regulator Fis | |||
4735 | DUF2732 family protein | |||
4740 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen5116ORF4740P |
4745 | replication endonuclease | |||
7140 | IS6-like element IS26 family transposase | |||
7145 | M | M.StyCORF187P (49% identity) | M.Sen5116ORF7145P | |
7150 | thermonuclease family protein | |||
7730 | ead/Ea22-like family protein | |||
7735 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen5116ORF7735P |
7740 | DUF551 domain-containing protein | |||
11075 | PerC family transcriptional regulator | |||
11080 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen5116ORF11080P |
11085 | RusA family crossover junction | |||
11330 | phosphohydrolase | |||
11335 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen5116DcmP |
11340 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen5116DcmP |
11345 | drug/metabolite exporter YedA | |||
21935 | BREX system P-loop protein BrxC | |||
21940 | RM | StyUK1IV (100% identity) | GATCAG | Sen5116ORF21940P |
21945 | AAA family ATPase | |||
23860 | LexA family transcriptional regulator | |||
23865 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen5116ORF23865P |
23870 | PerC family transcriptional regulator | |||
plasmid pFSIS12035116-1 | ||||
670 | thermonuclease family protein | |||
675 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen5116ORF675P |
680 | 55 aa hypothetical protein | |||
1155 | 48 aa hypothetical protein | |||
1160 | M | M.YpsF1ORFBP (100% identity) | M.Sen5116ORF1160P | |
1165 | 202 aa hypothetical protein | |||
1295 | DNA-binding protein | |||
1300 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen5116ORF1300P |
1305 | 284 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19470 | small effector SsaA | |||
19475 | R | StyUK1IP (99% identity) | CAGAG | Sen5116ORF19480P |
19480 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen5116ORF19480P |
19485 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21770 | BrnT family toxin | |||
21775 | R | StyUK1MrrP (100% identity) | Sen5116MrrP | |
21780 | type I restriction-modification system | |||
21960 | protease Lon-related BREX system protein BrxL | |||
21965 | R | StyLTMrrP (100% identity) | Sen5116Mrr2P | |
21970 | AAA domain-containing protein |