Escherichia coli AHM9C68I |
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Putative Escherichia coli AHM9C68I RM systems
Ref: He,W. et al. J Hazard Mater 446, 130725 (2023)
REBASE ref # 36917
| Sequence length: | GenBank #: | |
| Chromosome: | 4,633,559 bp | CP104618 |
| plasmid pHNAH968: | 133,317 bp | CP104619 |
| plasmid pHNAH968-1: | 89,710 bp | CP104620 |
| plasmid pHNAH968-2: | 84,082 bp | CP104621 |
REBASE acronym: EcoC68
Org_num: 67969
All begin N5859_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3650 | 394 aa hypothetical protein | |||
| 3655 | R | SflFF64ORF3630P (100% identity) | EcoC68ORF3665P | |
| 3660 | S | S.SflFF64ORF3630P (100% identity) | S1.EcoC68ORF3665P | |
| 3665 | M | M.SflFF64ORF3630P (100% identity) | M.EcoC68ORF3665P | |
| 3670 | DUF262 domain-containing protein | |||
| 19340 | IS1-like element IS1A family transposase | |||
| 19345 | S | S.EcoC61ORF19420P (100% identity) | S.EcoC68ORF19345P | |
| 19350 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | cell division protein DamX | |||
| 1630 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC68DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 8055 | 252 aa hypothetical protein | |||
| 8060 | R | EcoYSP81ORFBP (100% identity) | RCSRC | EcoC68ORF8060P |
| 8065 | transcription factor | |||
| 8890 | phosphohydrolase | |||
| 8895 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoC68DcmP |
| 8900 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoC68DcmP |
| 8905 | drug/metabolite exporter YedA | |||
| 19610 | IS5-like element ISKpn26 family transposase | |||
| 19615 | R | SflFF64ORF19855P (100% identity) | GAAC | EcoC68ORF19615P |
| 19620 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pHNAH968 | ||||
| 23165 | 76 aa hypothetical protein | |||
| 23170 | M | M.EcoR17ORF10870P (100% identity) | M.EcoC68ORF23170P | |
| 23175 | 290 aa hypothetical protein | |||
| plasmid pHNAH968-1 | ||||
| 23480 | 103 aa hypothetical protein | |||
| 23485 | M | M.SflC32ORFDP (100% identity) | SAY | M.EcoC68ORF23485P |
| 23490 | 73 aa hypothetical protein | |||
| plasmid pHNAH968-2 | ||||
| 23995 | 97 aa hypothetical protein | |||
| 24000 | M | M.Xca80ORFEP (100% identity) | M.EcoC68ORF24000P | |
| 24005 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pHNAH968 | ||||
| 22525 | DUF4391 domain-containing protein | |||
| 22530 | M | M.Eco17C02ORF24160P (99% identity) | M.EcoC68ORF22530P | |
| 22535 | R | EcoJH51ORF24975P (99% identity) | EcoC68ORF22530P | |
| 22540 | recombinase RecA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8010 | 86 aa hypothetical protein | |||
| 8015 | R | EcoPI12ORF8315P (100% identity) | EcoC68ORF8015P | |
| 8020 | 67 aa hypothetical protein | |||
| 19350 | endoribonuclease SymE | |||
| 19355 | R | EcoVA2GmrSDP (63% identity) | EcoC68GmrSDP | |
| 19360 | DUF262 domain-containing protein | |||