Escherichia coli SYNB1353 |
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Putative Escherichia coli SYNB1353 RM systems
Ref: Perreault,M. et al. unpublished
REBASE ref # 36932
Complete sequence: 5,004,036 bp
GenBank #: CP126317
REBASE acronym: Eco1353
Org_num: 67998
All begin QMZ63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17435 | endoribonuclease SymE | |||
| 17440 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1353ORF17450P |
| 17445 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1353ORF17450P |
| 17450 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1353ORF17450P |
| 17455 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15300 | phage holin | |||
| 15305 | M | M.EcoZE21ORF10265P (100% identity) | M.Eco1353ORF15305P | |
| 15310 | TrmB family transcriptional regulator | |||
| 15340 | RusA family crossover junction | |||
| 15345 | M | M.EcoZE21ORF10305P (100% identity) | M.Eco1353ORF15345P | |
| 15350 | conserved phage C-terminal domain-containing | |||
| 15850 | drug/metabolite exporter YedA | |||
| 15855 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco1353DcmP |
| 15860 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1353DcmP |
| 15865 | phosphohydrolase | |||
| 17075 | helix-turn-helix domain-containing protein | |||
| 17080 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco1353ORF17080P |
| 17085 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco1353ORF17080P |
| 17090 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1353ORF17080P |
| 17095 | McrC family protein | |||
| 23560 | cell division protein DamX | |||
| 23565 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1353DamP |
| 23570 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17090 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17095 | R | EcosS9McrCP (100% identity) | Eco1353McrCP | |
| 17100 | restriction endonuclease | |||
| 17105 | IS3-like element ISEc52 family transposase | |||
| 17110 | R | EcosS3McrBP (72% identity) | Eco1353McrBP | |
| 17115 | glycosyltransferase | |||
| 17450 | class I SAM-dependent DNA methyltransferase | |||
| 17455 | R | Ecou021MrrP (100% identity) | Eco1353MrrP | |
| 17460 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11720 | recombination protein NinB | |||
| 11725 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1353ORF11725P |
| 11730 | NinE family protein | |||