Escherichia coli JNE120393 |
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Putative Escherichia coli JNE120393 RM systems
Ref: Kubomura,A. et al. unpublished
REBASE ref # 36930
| Sequence length: | GenBank #: | |
| Chromosome: | 5,072,830 bp | AP027246 |
| plasmid pJNE120393-1: | 160,690 bp | AP027247 |
REBASE acronym: Eco393
Org_num: 67987
All begin JNE120393_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25280 | 60 aa hypothetical protein | |||
| 25290 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco393ORF25290P | |
| 25300 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco393ORF25290P | |
| 25310 | 81 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1450 | HD superfamily phosphohydrolase | |||
| 1460 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco393DcmP |
| 1470 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco393DcmP |
| 1480 | amino acid exporter for phenylalanine | |||
| 9050 | 142 aa hypothetical protein | |||
| 9060 | M | M.Ecostr10ORF2400P (100% identity) | M.Eco393ORF9060P | |
| 9070 | 65 aa hypothetical protein | |||
| 10720 | repressor | |||
| 10730 | M | M.Ecostr10ORF1530P (100% identity) | GATC | M.Eco393ORF10730P |
| 10740 | 57 aa hypothetical protein | |||
| 11600 | Shiga toxin 2 subunit A | |||
| 11610 | M | M.Eco7807ORF540P (100% identity) | M.Eco393ORF11610P | |
| 11620 | 65 aa hypothetical protein | |||
| 13680 | Shiga toxin 2 subunit A | |||
| 13690 | M | M.EcoAVFP2ORFAP (100% identity) | M.Eco393ORF13690P | |
| 13700 | 65 aa hypothetical protein | |||
| 25160 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 25170 | R | Ecostr10ORF18645P (100% identity) | Eco393ORF25170P | |
| 25180 | 332 aa hypothetical protein | |||
| 25210 | ATPase-like protein | |||
| 25220 | RM | Ecostr10ORF18620P (100% identity) | Eco393ORF25220P | |
| 25230 | alkaline phosphatase | |||
| 34540 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco393DamP |
| 34560 | D-ribulose-5-phosphate 3-epimerase | |||
| 47830 | replication protein | |||
| 47840 | R | Ecostr10ORF20P (100% identity) | GRGCYC | Eco393ORF47860P |
| 47850 | C | C.Ecostr10ORF20P (100% identity) | C.Eco393ORF47860P | |
| 47860 | M | M.EcoST130ORF15675P (90% identity) | GRGCYC | M.Eco393ORF47860P |
| 47870 | phage portal protein | |||
| plasmid pJNE120393-1 | ||||
| 48750 | 308 aa hypothetical protein | |||
| 48760 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco393ORF48760P |
| 48770 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10310 | 54 aa hypothetical protein | |||
| 10320 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco393ORF10320P |
| 10330 | DNA-invertase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16240 | phage protein NinF | |||
| 16250 | M | M.SflLIN11ORF7170P (100% identity) | GATC | M.Eco393ORF16250P |
| 16260 | recombination protein | |||