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Putative Phocaeicola dorei 2 RM systems
Ref: Kijner,S. et al. Nat Commun (2023) In press
REBASE ref # 36958
Complete sequence: 5,484,726 bp
GenBank #: CP126056
REBASE acronym: Pdo2
Org_num: 68136
All begin QNN11_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
18905 | 98 aa hypothetical protein | |||
18910 | S | S1.Bdo12C01ORF1796P (59% identity) | S5.Pdo2ORF18935P | |
18915 | S | S3.Pdo1047IIP (100% identity) | S4.Pdo2ORF18935P | |
??? | S | S3.Pdo1ORF14765P (100% identity) | S3.Pdo2ORF18935P | |
18925 | S | S5.Pdo1047IIP (88% identity) | S2.Pdo2ORF18935P | |
18930 | S | S1.PvuC06ORF3690P (99% identity) | S1.Pdo2ORF18935P | |
18935 | M | M.Pdo3C03ORF2038P (100% identity) | M.Pdo2ORF18935P | |
18940 | R | PvuC06ORF3690P (98% identity) | Pdo2ORF18935P | |
18945 | DUF1524 domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
705 | 552 aa hypothetical protein | |||
710 | M | M.PmeBin675ORFAP (89% identity) | M.Pdo2ORF710P | |
715 | 144 aa hypothetical protein | |||
3785 | 80 aa hypothetical protein | |||
3790 | M | M.Pvu191ORF3365P (99% identity) | M.Pdo2ORF3790P | |
3795 | 103 aa hypothetical protein | |||
4065 | site-specific integrase | |||
4070 | M | M.Bfr1ORF13640P (78% identity) | M.Pdo2ORF4070P | |
4075 | R | Ppa700821ORF351P (53% identity) | Pdo2ORF4070P | |
4080 | serine dehydrogenasease | |||
15800 | restriction endonuclease subunit M | |||
??? | RM | Pvu1ORF20820P (70% identity) | Pdo2ORF15805P | |
15820 | 65 aa hypothetical protein | |||
16255 | restriction endonuclease | |||
16260 | C | C.Pdo3C03ORF1413P (100% identity) | C.Pdo2ORF16265P | |
??? | M | M.Pdo3C03ORF1413P (99% identity) | M.Pdo2ORF16265P | |
16275 | S | S.Bdo12C01ORF3632P (100% identity) | S.Pdo2ORF16265P | |
16280 | protein kinase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
15855 | 415 aa hypothetical protein | |||
15860 | R | BthDOT2GmrSDP (88% identity) | Pdo2GmrSDP | |
15865 | C39 family peptidase |