Ligilactobacillus salivarius S40 |
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Putative Ligilactobacillus salivarius S40 RM systems
Ref: Wang,Y. unpublished
REBASE ref # 18165
| Sequence length: | GenBank #: | |
| Chromosome: | 1,892,436 bp | CP114515 |
| plasmid unnamed2: | 213,653 bp | CP114517 |
REBASE acronym: LsaS40
Org_num: 67492
All begin O2U04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3840 | PTS transporter subunit EIIC | |||
| 3845 | S | S2.LsaS96ORF5525P (57% identity) | S3.LsaS40ORF3865P | |
| 3850 | site-specific integrase | |||
| 3855 | S | S2.LsaS99ORF7440P (100% identity) | S2.LsaS40ORF3865P | |
| 3860 | S | S3.LsaS91ORF5230P (95% identity) | S1.LsaS40ORF3865P | |
| 3865 | M | M.LsaS99ORF7440P (100% identity) | M.LsaS40ORF3865P | |
| 3870 | R | LsaS99ORF7440P (100% identity) | LsaS40ORF3865P | |
| 3875 | 78 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 11260 | 80 aa hypothetical protein | |||
| 11265 | RM | RM2.LsaS99ORF10490P (98% identity) | RM1.LsaS40ORF11265P | |
| 11270 | RM | RM1.LsaS99ORF10490P (100% identity) | RM2.LsaS40ORF11265P | |
| 11275 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6150 | 109 aa hypothetical protein | |||
| 6155 | R | LsaS99MrrP (100% identity) | LsaS40MrrP | |
| 6160 | UPF0489 family protein | |||
| 6695 | IMP dehydrogenase | |||
| 6700 | R | LsaS99ORF4615P (100% identity) | LsaS40ORF6700P | |
| 6705 | tyrosine-protein phosphatase | |||