Edwardsiella ictaluri STH22820 |
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Putative Edwardsiella ictaluri STH22820 RM systems
Ref: Imajoh,M. and Kawahara,M. unpublished
REBASE ref # 36754
Complete sequence: 3,765,444 bp
GenBank #: AP028123
REBASE acronym: Eic820
Org_num: 67175
All begin STH22820_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 194 aa hypothetical protein | |||
| 340 | R | EicYCHORF180P (100% identity) | Eic820ORF350P | |
| 350 | M | M.EicYCHORF180P (100% identity) | M.Eic820ORF350P | |
| 360 | S | S1.Eic921ORF350P (100% identity) | S1.Eic820ORF350P | |
| 370 | 72 aa hypothetical protein | |||
| 380 | 267 aa hypothetical protein | |||
| 390 | IS256-like element ISSoEn2 family transposase | |||
| 400 | S | S2.EicYCHORF180P (100% identity) | S2.Eic820ORF350P | |
| 410 | 328 aa hypothetical protein | |||
| 4840 | 140 aa hypothetical protein | |||
| 4850 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic820ORF4850P |
| 4860 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic820ORF4850P |
| 4870 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic820ORF4850P |
| 4880 | 53 aa hypothetical protein | |||
| 9310 | 110 aa hypothetical protein | |||
| 9320 | M | M.EicT11ORF4795P (100% identity) | M.Eic820ORF9320P | |
| 9330 | S | S.EicYCHORF4815P (100% identity) | S.Eic820ORF9320P | |
| 9340 | R | EicT11ORF4795P (68% identity) | Eic820ORF9320AP | |
| 9350 | 62 aa hypothetical protein | |||
| 9360 | R | EicT11ORF4795P (31% identity) | Eic820ORF9320BP | |
| 9370 | 64 aa hypothetical protein | |||
| 22220 | NADH oxidoreductase | |||
| 22230 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic820ORF22260P |
| 22240 | Fic family protein | |||
| 22250 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic820ORF22260P |
| 22260 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic820ORF22260P |
| 22270 | low-specificity L-threonine aldolase | |||
| 30440 | SprT family zinc-dependent metalloprotease | |||
| 30450 | R | EicYCHORF15685P (100% identity) | Eic820ORF30490P | |
| 30460 | macro domain-containing protein | |||
| 30470 | DUF4433 domain-containing protein | |||
| 30480 | S | S.Eic921ORF30350P (100% identity) | S.Eic820ORF30490P | |
| 30490 | M | M.EicYCHORF15685P (100% identity) | M.Eic820ORF30490P | |
| 30500 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2550 | TIGR03747 family integrating conjugative element | |||
| 2560 | R | EicYCHORF1525P (100% identity) | Eic820ORF2570P | |
| 2570 | M | M.EicYCHORF1525P (100% identity) | M.Eic820ORF2570P | |
| 2580 | RAQPRD family integrative conjugative element | |||
| 13490 | 215 aa hypothetical protein | |||
| 13500 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic820ORF13510P |
| 13510 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic820ORF13510P |
| 13520 | V | V.EicYCHORF6960P (100% identity) | V.Eic820ORF13510P | |
| 13530 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9360 | 343 aa hypothetical protein | |||
| ??? | R | EicYCHMcrBP (100% identity) | Eic820McrBP | |
| 9390 | R | Eic921McrCP (100% identity) | Eic820McrCP | |
| 9400 | 154 aa hypothetical protein | |||