Edwardsiella ictaluri STA22820 |
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Putative Edwardsiella ictaluri STA22820 RM systems
Ref: Imajoh,M. and Kawahara,M. unpublished
REBASE ref # 36754
Complete sequence: 3,765,283 bp
GenBank #: AP028119
REBASE acronym: Eic2820
Org_num: 67174
All begin STA22820_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 194 aa hypothetical protein | |||
| 340 | R | EicYCHORF180P (100% identity) | Eic2820ORF350P | |
| 350 | M | M.EicYCHORF180P (100% identity) | M.Eic2820ORF350P | |
| 360 | S | S1.Eic921ORF350P (100% identity) | S1.Eic2820ORF350P | |
| 370 | IS256-like element ISSoEn2 family transposase | |||
| 380 | IS256-like element ISSoEn2 family transposase | |||
| 390 | S | S2.EicYCHORF180P (100% identity) | S2.Eic2820ORF350P | |
| 400 | 328 aa hypothetical protein | |||
| 4830 | 140 aa hypothetical protein | |||
| 4840 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic2820ORF4840P |
| 4850 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic2820ORF4840P |
| 4860 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic2820ORF4840P |
| 4870 | 53 aa hypothetical protein | |||
| 9300 | 110 aa hypothetical protein | |||
| 9310 | M | M.EicT11ORF4795P (100% identity) | M.Eic2820ORF9310P | |
| 9320 | S | S.EicYCHORF4815P (100% identity) | S.Eic2820ORF9310P | |
| 9330 | R | EicT11ORF4795P (67% identity) | Eic2820ORF9310AP | |
| 9340 | R | EicT11ORF4795P (31% identity) | Eic2820ORF9310BP | |
| 9350 | 64 aa hypothetical protein | |||
| 22080 | NADH oxidoreductase | |||
| 22090 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic2820ORF22120P |
| 22100 | Fic family protein | |||
| 22110 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic2820ORF22120P |
| 22120 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic2820ORF22120P |
| 22130 | low-specificity L-threonine aldolase | |||
| 30220 | SprT family zinc-dependent metalloprotease | |||
| 30230 | R | EicYCHORF15685P (100% identity) | Eic2820ORF30270P | |
| 30240 | macro domain-containing protein | |||
| 30250 | DUF4433 domain-containing protein | |||
| 30260 | S | S.EicYCHORF15685P (100% identity) | S.Eic2820ORF30270P | |
| 30270 | M | M.EicYCHORF15685P (100% identity) | M.Eic2820ORF30270P | |
| 30280 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2550 | TIGR03747 family integrating conjugative element | |||
| 2560 | R | EicYCHORF1525P (100% identity) | Eic2820ORF2570P | |
| 2570 | M | M.EicYCHORF1525P (100% identity) | M.Eic2820ORF2570P | |
| 2580 | RAQPRD family integrative conjugative element | |||
| 13430 | 215 aa hypothetical protein | |||
| 13440 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic2820ORF13450P |
| 13450 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic2820ORF13450P |
| 13460 | V | V.EicYCHORF6960P (100% identity) | V.Eic2820ORF13450P | |
| 13470 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9340 | 349 aa hypothetical protein | |||
| ??? | R | EicYCHMcrBP (100% identity) | Eic2820McrBP | |
| 9370 | R | Eic921McrCP (100% identity) | Eic2820McrCP | |
| 9380 | 154 aa hypothetical protein | |||