Edwardsiella ictaluri STU22816 |
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Putative Edwardsiella ictaluri STU22816 RM systems
Ref: Imajoh,M. and Kawahara,M. unpublished
REBASE ref # 36754
Complete sequence: 3,771,947 bp
GenBank #: AP028115
REBASE acronym: Eic22816
Org_num: 67216
All begin STU22816_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 194 aa hypothetical protein | |||
| 340 | R | EicYCHORF180P (100% identity) | Eic22816ORF350P | |
| 350 | M | M.EicYCHORF180P (100% identity) | M.Eic22816ORF350P | |
| 360 | S | S1.Eic921ORF350P (100% identity) | S1.Eic22816ORF350P | |
| 370 | IS256-like element ISSoEn2 family transposase | |||
| 380 | 77 aa hypothetical protein | |||
| 390 | 309 aa hypothetical protein | |||
| 400 | S | S2.EicYCHORF180P (100% identity) | S2.Eic22816ORF350P | |
| 410 | 328 aa hypothetical protein | |||
| 4860 | 140 aa hypothetical protein | |||
| 4870 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic22816ORF4870P |
| 4880 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic22816ORF4870P |
| 4890 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic22816ORF4870P |
| 4900 | 53 aa hypothetical protein | |||
| 9350 | 110 aa hypothetical protein | |||
| 9360 | M | M.EicT11ORF4795P (100% identity) | M.Eic22816ORF9360P | |
| 9370 | S | S.EicYCHORF4815P (100% identity) | S.Eic22816ORF9360P | |
| 9380 | R | EicT11ORF4795P (68% identity) | Eic22816ORF9360AP | |
| 9390 | R | EicT11ORF4795P (31% identity) | Eic22816ORF9360BP | |
| 9400 | 64 aa hypothetical protein | |||
| 22140 | NADH oxidoreductase | |||
| 22150 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic22816ORF22180P |
| 22160 | Fic family protein | |||
| 22170 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic22816ORF22180P |
| 22180 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic22816ORF22180P |
| 22190 | low-specificity L-threonine aldolase | |||
| 30290 | SprT family zinc-dependent metalloprotease | |||
| 30300 | R | EicYCHORF15685P (100% identity) | Eic22816ORF30340P | |
| 30310 | macro domain-containing protein | |||
| 30320 | DUF4433 domain-containing protein | |||
| 30330 | S | S.Eic921ORF30350P (100% identity) | S.Eic22816ORF30340P | |
| 30340 | M | M.EicYCHORF15685P (100% identity) | M.Eic22816ORF30340P | |
| 30350 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2550 | TIGR03747 family integrating conjugative element | |||
| 2560 | R | EicYCHORF1525P (100% identity) | Eic22816ORF2570P | |
| 2570 | M | M.EicYCHORF1525P (100% identity) | M.Eic22816ORF2570P | |
| 2580 | RAQPRD family integrative conjugative element | |||
| 13450 | 215 aa hypothetical protein | |||
| 13460 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic22816ORF13470P |
| 13470 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic22816ORF13470P |
| 13480 | V | V.EicYCHORF6960P (100% identity) | V.Eic22816ORF13470P | |
| 13490 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9390 | 349 aa hypothetical protein | |||
| ??? | R | EicYCHMcrBP (100% identity) | Eic22816McrBP | |
| 9420 | R | Eic921McrCP (100% identity) | Eic22816McrCP | |
| 9430 | 154 aa hypothetical protein | |||