Edwardsiella ictaluri STU22726 |
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Putative Edwardsiella ictaluri STU22726 RM systems
Ref: Imajoh,M. and Kawahara,M. unpublished
REBASE ref # 36754
Complete sequence: 3,771,966 bp
GenBank #: AP028110
REBASE acronym: Eic726
Org_num: 67176
All begin STU22726_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 194 aa hypothetical protein | |||
| 340 | R | EicYCHORF180P (100% identity) | Eic726ORF350P | |
| 350 | M | M.EicYCHORF180P (100% identity) | M.Eic726ORF350P | |
| 360 | S | S1.Eic921ORF350P (100% identity) | S1.Eic726ORF350P | |
| 370 | IS256-like element ISSoEn2 family transposase | |||
| 380 | IS256-like element ISSoEn2 family transposase | |||
| 390 | S | S2.EicYCHORF180P (100% identity) | S2.Eic726ORF350P | |
| 400 | 328 aa hypothetical protein | |||
| 4830 | 140 aa hypothetical protein | |||
| 4840 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic726ORF4840P |
| 4850 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic726ORF4840P |
| 4860 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic726ORF4840P |
| 4870 | 53 aa hypothetical protein | |||
| 9300 | 110 aa hypothetical protein | |||
| 9310 | M | M.EicT11ORF4795P (100% identity) | M.Eic726ORF9310P | |
| 9320 | S | S.EicYCHORF4815P (100% identity) | S.Eic726ORF9310P | |
| 9330 | R | EicT11ORF4795P (67% identity) | Eic726ORF9310AP | |
| 9340 | 57 aa hypothetical protein | |||
| 9350 | R | EicT11ORF4795P (31% identity) | Eic726ORF9310BP | |
| 9360 | 64 aa hypothetical protein | |||
| 22130 | NADH oxidoreductase | |||
| 22140 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic726ORF22170P |
| 22150 | Fic family protein | |||
| 22160 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic726ORF22170P |
| 22170 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic726ORF22170P |
| 22180 | low-specificity L-threonine aldolase | |||
| 30280 | SprT family zinc-dependent metalloprotease | |||
| 30290 | R | EicYCHORF15685P (100% identity) | Eic726ORF30330P | |
| 30300 | macro domain-containing protein | |||
| 30310 | DUF4433 domain-containing protein | |||
| 30320 | S | S.Eic921ORF30350P (100% identity) | S.Eic726ORF30330P | |
| 30330 | M | M.EicYCHORF15685P (100% identity) | M.Eic726ORF30330P | |
| 30340 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2530 | TIGR03747 family integrating conjugative element | |||
| 2540 | R | EicYCHORF1525P (100% identity) | Eic726ORF2550P | |
| 2550 | M | M.EicYCHORF1525P (100% identity) | M.Eic726ORF2550P | |
| 2560 | RAQPRD family integrative conjugative element | |||
| 13440 | 215 aa hypothetical protein | |||
| 13450 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic726ORF13460P |
| 13460 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic726ORF13460P |
| 13470 | V | V.EicYCHORF6960P (100% identity) | V.Eic726ORF13460P | |
| 13480 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9350 | 343 aa hypothetical protein | |||
| ??? | R | EicYCHMcrBP (100% identity) | Eic726McrBP | |
| 9380 | R | Eic921McrCP (100% identity) | Eic726McrCP | |
| 9390 | 154 aa hypothetical protein | |||