Escherichia coli YZLc23-1 |
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Putative Escherichia coli YZLc23-1 RM systems
Ref: Yin,Y. unpublished
REBASE ref # 34560
| Sequence length: | GenBank #: | |
| Chromosome: | 4,903,654 bp | CP123266 |
| plasmid pYZLc23-1_142k: | 142,926 bp | CP123268 |
| plasmid pYZLc23-1_NDM-13_96k: | 96,063 bp | CP123269 |
REBASE acronym: Eco1
Org_num: 67419
All begin N4686_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.Eco1ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 9480 | phosphohydrolase | |||
| 9485 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.Eco1DcmP |
| 9490 | V | V.EcosEC71DcmP (100% identity) | V.Eco1DcmP | |
| 9495 | drug/metabolite exporter YedA | |||
| 15335 | 273 aa hypothetical protein | |||
| 15340 | M | M.Ecoi162ORF2844P (100% identity) | M.Eco1ORF15340P | |
| 15345 | TraR/DksA family transcriptional regulator | |||
| 20670 | osmoprotectant transport activator ProQ | |||
| 20675 | M | M.SflFF24DndBP (100% identity) | M.Eco1DndBP | |
| 20680 | DNA phosphorothioation system sulfurtransferase | |||
| 20675 | DNA sulfur modification protein DndB | |||
| 20680 | M | M.SflFF24DndCP (100% identity) | M.Eco1DndCP | |
| 20685 | DNA sulfur modification protein DndD | |||
| 20680 | DNA phosphorothioation system sulfurtransferase | |||
| 20685 | M | M.SflFF24DndDP (100% identity) | M.Eco1DndDP | |
| 20690 | DNA sulfur modification protein DndE | |||
| 20685 | DNA sulfur modification protein DndD | |||
| 20690 | M | M.SflFF24DndEP (100% identity) | M.Eco1DndEP | |
| 20695 | DGQHR domain-containing protein | |||
| 20710 | DNA phosphorothioation-dependent restriction | |||
| 20715 | R | SflFF24DptGP (100% identity) | Eco1DptGP | |
| 20720 | DNA phosphorothioation-dependent restriction | |||
| 20715 | DNA phosphorothioation-dependent restriction | |||
| 20720 | R | SflFF24DptFP (100% identity) | Eco1DptFP | |
| 20725 | integrase | |||
| plasmid pYZLc23-1_142k | ||||
| 25305 | 70 aa hypothetical protein | |||
| 25320 | M | M.EcoLc41ORF24240P (100% identity) | M.Eco1ORF25320P | |
| 25325 | recombination-associated protein RdgC | |||
| plasmid pYZLc23-1_NDM-13_96k | ||||
| 25505 | 103 aa hypothetical protein | |||
| 25510 | M | M.SflN101ORF24625P (100% identity) | M.Eco1ORF25510P | |
| 25515 | 73 aa hypothetical protein | |||