Escherichia coli KFS-D01 |
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Putative Escherichia coli KFS-D01 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
| Sequence length: | GenBank #: | |
| Chromosome: | 4,710,765 bp | CP125039 |
| plasmid pKFS-D01_1: | 119,087 bp | CP125040 |
REBASE acronym: EcoSC01
Org_num: 67398
All begin QL140_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 455 | GTPase family protein | |||
| 460 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | M.EcoSC01ORF460P |
| 465 | S | S.EcosNDM5ORF17455P (100% identity) | AAAYNNNNNCTC | S.EcoSC01ORF460P |
| 470 | R | Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | EcoSC01ORF460P |
| 475 | transposase | |||
| 14640 | IS1-like element IS1A family transposase | |||
| 14645 | R | EcosNDM5ORF9185P (100% identity) | EcoSC01ORF14645P | |
| 14650 | SprT family zinc-dependent metalloprotease | |||
| plasmid pKFS-D01_1 | ||||
| 23285 | IS1-like element IS1A family transposase | |||
| 23290 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | EcoSC01ORF23300P |
| 23295 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoSC01ORF23300P |
| 23300 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.EcoSC01ORF23300P |
| 23305 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 275 | LexA family transcriptional regulator | |||
| 280 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoSC01ORF280P |
| 285 | PerC family transcriptional regulator | |||
| 7150 | cell division protein DamX | |||
| 7155 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSC01DamP |
| 7160 | ribulose-phosphate 3-epimerase | |||
| 7780 | DUF2556 family protein | |||
| 7785 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoSC01ORF7785P |
| 7790 | DNA-binding transcriptional regulator Fis | |||
| 14325 | phosphohydrolase | |||
| 14330 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoSC01DcmP |
| 14335 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoSC01DcmP |
| 14340 | drug/metabolite exporter YedA | |||
| plasmid pKFS-D01_1 | ||||
| 23190 | 73 aa hypothetical protein | |||
| 23195 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoSC01ORF23195P |
| 23200 | 103 aa hypothetical protein | |||