Escherichia coli KSE-B05 |
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Putative Escherichia coli KSE-B05 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
| Sequence length: | GenBank #: | |
| Chromosome: | 4,710,376 bp | CP125003 |
| plasmid pKSE-B05_1: | 131,123 bp | CP125002 |
REBASE acronym: EcoB05
Org_num: 67405
All begin QL141_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3955 | SprT family zinc-dependent metalloprotease | |||
| 3960 | R | EcosNDM5ORF9185P (100% identity) | EcoB05ORF3955P | |
| 3965 | IS1-like element IS1A family transposase | |||
| plasmid pKSE-B05_1 | ||||
| 205 | type II toxin-antitoxin system Phd/YefM family | |||
| 210 | M | M.EcoSEC14ORF22665P (100% identity) | M.EcoB05ORF210P | |
| 215 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4240 | drug/metabolite exporter YedA | |||
| 4245 | V | V.EcoYJ4DcmP (100% identity) | V.EcoB05DcmP | |
| 4250 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoB05DcmP |
| 4255 | phosphohydrolase | |||
| 9275 | integrase | |||
| 9280 | R | SflFF24DptFP (99% identity) | EcoB05DptFP | |
| 9285 | DNA phosphorothioation-dependent restriction | |||
| 9280 | DNA phosphorothioation-dependent restriction | |||
| 9285 | R | SflFF24DptGP (100% identity) | EcoB05DptGP | |
| 9290 | DNA phosphorothioation-dependent restriction | |||
| 9285 | DNA phosphorothioation-dependent restriction | |||
| 9290 | R | EcosEC5DptHP (100% identity) | EcoB05DptHP | |
| 9295 | accessory gene regulator B family protein | |||
| 9305 | DGQHR domain-containing protein | |||
| 9310 | M | M.SflFF24DndEP (100% identity) | M.EcoB05DndEP | |
| 9315 | DNA sulfur modification protein DndD | |||
| 9310 | DNA sulfur modification protein DndE | |||
| 9315 | M | M.Eco1389DndDP (99% identity) | M.EcoB05DndDP | |
| 9320 | DNA phosphorothioation system sulfurtransferase | |||
| 9315 | DNA sulfur modification protein DndD | |||
| 9320 | M | M.SflFF24DndCP (100% identity) | M.EcoB05DndCP | |
| 9325 | DNA sulfur modification protein DndB | |||
| 9320 | DNA phosphorothioation system sulfurtransferase | |||
| 9325 | M | M.SflFF24DndBP (100% identity) | M.EcoB05DndBP | |
| 9330 | ProQ/FinO family protein | |||
| 10995 | DNA-binding transcriptional regulator Fis | |||
| 11000 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoB05ORF11000P |
| 11005 | DUF2556 family protein | |||
| 11620 | ribulose-phosphate 3-epimerase | |||
| 11625 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoB05DamP |
| 11630 | cell division protein DamX | |||
| 16360 | restriction endonuclease | |||
| 16365 | R | SflSTLE4ORF19250P (99% identity) | EcoB05ORF16365P | |
| 16370 | HNH endonuclease | |||
| 18260 | PerC family transcriptional regulator | |||
| 18265 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoB05ORF18265P |
| 18270 | LexA family transcriptional regulator | |||
| 23435 | TrmB family transcriptional regulator | |||
| 23440 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoB05ORF23440P |
| 23455 | DUF3927 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18565 | IS3-like element IS2 family transposase | |||
| 18570 | R | SflFF80GmrDP (55% identity) | EcoB05GmrDP | |
| 18575 | IS1-like element IS1A family transposase | |||