Escherichia coli KSE-D22 |
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Putative Escherichia coli KSE-D22 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
Complete sequence: 5,029,756 bp
GenBank #: CP124975
REBASE acronym: EcoED22
Org_num: 67411
All begin QL149_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17840 | endoribonuclease SymE | |||
| 17845 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.EcoED22ORF17850P |
| 17850 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.EcoED22ORF17850P |
| 17855 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | EcoED22ORF17850P |
| 17860 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3915 | drug/metabolite exporter YedA | |||
| 3920 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoED22DcmP |
| 3925 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoED22DcmP |
| 3930 | phosphohydrolase | |||
| 7180 | PerC family transcriptional regulator | |||
| 7185 | M | M.Eho218ORF16395P (100% identity) | GATC | M.EcoED22ORF7185P |
| 7190 | DUF1382 family protein | |||
| 11345 | DNA-binding transcriptional regulator Fis | |||
| 11350 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoED22ORF11350P |
| 11355 | DUF2556 family protein | |||
| 11945 | ribulose-phosphate 3-epimerase | |||
| 11950 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoED22DamP |
| 11955 | cell division protein DamX | |||
| 24965 | TrmB family transcriptional regulator | |||
| 24970 | M | M.SflC32ORFBP (100% identity) | M.EcoED22ORF24970P | |
| 24990 | tellurite resistance protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4370 | shufflon system plasmid conjugative transfer | |||
| 4375 | R | Ecost88ORF24685P (100% identity) | EcoED22ORF4380P | |
| 4380 | M | M.EcosS2ORF3675P (100% identity) | M.EcoED22ORF4380P | |
| 4385 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17825 | 26 aa hypothetical protein | |||
| ??? | R | Ecos137GmrSDP (100% identity) | EcoED22GmrSDP | |
| 17840 | endoribonuclease SymE | |||