Escherichia coli ETEC1743 |
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Putative Escherichia coli ETEC1743 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,286,207 bp | CP122751 |
| plasmid unnamed2: | 112,461 bp | CP122753 |
| plasmid unnamed3: | 104,941 bp | CP122754 |
| plasmid unnamed5: | 128,540 bp | CP122756 |
REBASE acronym: EcoC1743
Org_num: 67355
All begin QDW98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3860 | 122 aa hypothetical protein | |||
| 3865 | R | EcoEC521ORF29600P (100% identity) | EcoC1743ORF3875P | |
| 3870 | S | S.EcoEC521ORF29600P (100% identity) | S.EcoC1743ORF3875P | |
| 3875 | M | M.EcoEC521ORF29600P (100% identity) | M.EcoC1743ORF3875P | |
| 3880 | GTPase family protein | |||
| 22445 | DUF262 domain-containing HNH endonuclease family | |||
| 22450 | R | EcoXH993ORF23720P (100% identity) | EcoC1743ORF22455P | |
| 22455 | M | M.EcoUM1887ORF20145P (100% identity) | M.EcoC1743ORF22455P | |
| 22460 | S | S.EcoC1745ORF22540P (100% identity) | S.EcoC1743ORF22455P | |
| 22465 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 370 | osmoprotectant transport activator ProQ | |||
| 375 | M | M.EcoSTEC507DndBP (99% identity) | M.EcoC1743DndBP | |
| 380 | DNA phosphorothioation system sulfurtransferase | |||
| 375 | DNA sulfur modification protein DndB | |||
| 380 | M | M.SflFF24DndCP (100% identity) | M.EcoC1743DndCP | |
| 385 | DNA sulfur modification protein DndD | |||
| 380 | DNA phosphorothioation system sulfurtransferase | |||
| 385 | M | M.SflFF24DndDP (100% identity) | M.EcoC1743DndDP | |
| 390 | DNA sulfur modification protein DndE | |||
| 385 | DNA sulfur modification protein DndD | |||
| 390 | M | M.SflFF24DndEP (100% identity) | M.EcoC1743DndEP | |
| 395 | DNA phosphorothioation-associated DGQHR protein | |||
| 400 | 172 aa hypothetical protein | |||
| 405 | R | EcoC1744DptHP (100% identity) | EcoC1743DptHP | |
| 410 | DNA phosphorothioation-dependent restriction | |||
| 405 | DNA phosphorothioation-dependent restriction | |||
| 410 | R | SenLY67DptGP (100% identity) | EcoC1743DptGP | |
| 415 | DNA phosphorothioation-dependent restriction | |||
| 410 | DNA phosphorothioation-dependent restriction | |||
| 415 | R | SenLY67DptFP (100% identity) | EcoC1743DptFP | |
| 420 | integrase | |||
| 2010 | cell division protein DamX | |||
| 2015 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC1743DamP |
| 2020 | ribulose-phosphate 3-epimerase | |||
| 2635 | DUF2556 family protein | |||
| 2640 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC1743ORF2640P |
| 2645 | DNA-binding transcriptional regulator Fis | |||
| 6255 | adhesin-like autotransporter YpjA/EhaD | |||
| 6260 | R | SenB82ORF5360P (100% identity) | EcoC1743ORF6260P | |
| 6265 | primase-like DNA-binding domain-containing | |||
| 6445 | TrmB family transcriptional regulator | |||
| 6450 | M | M.EcoC1744ORF6450P (100% identity) | M.EcoC1743ORF6450P | |
| 6460 | 132 aa hypothetical protein | |||
| 10660 | phosphohydrolase | |||
| 10665 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC1743DcmP |
| 10670 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC1743DcmP |
| 10675 | drug/metabolite exporter YedA | |||
| 12945 | DUF977 family protein | |||
| 12950 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC1743ORF12950P | |
| 12955 | 60 aa hypothetical protein | |||
| 20580 | RusA family crossover junction | |||
| 20585 | M | M.EcoECO21ORF17780P (100% identity) | GATC | M.EcoC1743ORF20585P |
| 20590 | PerC family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 26900 | 103 aa hypothetical protein | |||
| 26905 | M | M.StyR64ORFAP (100% identity) | M.EcoC1743ORF26905P | |
| 26910 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 27375 | recombination-associated protein RdgC | |||
| 27380 | M | M.Sen9860ORF25540P (99% identity) | M.EcoC1743ORF27380P | |
| 27395 | IS66 family transposase | |||
| plasmid unnamed5 | ||||
| 28390 | 73 aa hypothetical protein | |||
| 28395 | M | M.Ecocq9ORF29710P (100% identity) | M.EcoC1743ORF28395P | |
| 28400 | 103 aa hypothetical protein | |||