Escherichia coli ETEC1739 |
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Putative Escherichia coli ETEC1739 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,760,634 bp | CP122758 |
| plasmid unnamed3: | 106,236 bp | CP122761 |
| plasmid unnamed8: | 88,929 bp | CP122766 |
| plasmid unnamed9: | 4,763 bp | CP122767 |
REBASE acronym: EcoC1739
Org_num: 67354
All begin QDW95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3330 | transposase domain-containing protein | |||
| 3335 | M | M.EcoC1735ORF3330P (100% identity) | AGGNNNNNRTTG | M.EcoC1739ORF3335P |
| 3340 | AAA family ATPase | |||
| 3345 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.EcoC1739ORF3335P |
| 3350 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | EcoC1739ORF3335P |
| 3355 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1610 | cell division protein DamX | |||
| 1615 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1739DamP |
| 1620 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC1739ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 6925 | recombination protein NinB | |||
| 6930 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoC1739ORF6930P |
| 6935 | NinE family protein | |||
| 9155 | HD domain-containing protein | |||
| 9160 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC1739DcmP |
| 9165 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC1739DcmP |
| 9170 | drug/metabolite exporter YedA | |||
| plasmid unnamed3 | ||||
| 24095 | 103 aa hypothetical protein | |||
| 24100 | M | M.EcoXJ61ORF24590P (100% identity) | M.EcoC1739ORF24100P | |
| 24105 | 73 aa hypothetical protein | |||
| plasmid unnamed8 | ||||
| 25605 | 73 aa hypothetical protein | |||
| 25610 | M | M.Sfl712783ORFFP (100% identity) | M.EcoC1739ORF25610P | |
| 25615 | 101 aa hypothetical protein | |||
| plasmid unnamed9 | ||||
| 25965 | 102 aa hypothetical protein | |||
| 25970 | M | M.EcoXJ61ORF24590P (92% identity) | M.EcoC1739ORF25970P | |
| 25975 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13585 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13590 | R | EcoC1733McrCP (100% identity) | EcoC1739McrCP | |
| 13595 | R | EcoUKMcrBP (100% identity) | EcoC1739McrBP | |
| 13600 | recombinase family protein | |||