Escherichia coli ETEC1736F |
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Putative Escherichia coli ETEC1736F RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,019,354 bp | CP122784 |
| plasmid unnamed1: | 116,488 bp | CP122785 |
| plasmid unnamed3: | 62,944 bp | CP122787 |
| plasmid unnamed4: | 11,300 bp | CP122788 |
| plasmid unnamed5: | 77,429 bp | CP122789 |
| plasmid unnamed6: | 121,897 bp | CP122790 |
REBASE acronym: EcoC1736F
Org_num: 67351
All begin QDX12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5585 | GTPase family protein | |||
| 5590 | M | M.EcoC1745ORF3890P (99% identity) | M.EcoC1736FORF5590P | |
| 5595 | S | S.EcoC1745ORF3890P (100% identity) | S.EcoC1736FORF5590P | |
| 5600 | R | EcoC1745ORF3890P (97% identity) | EcoC1736FORF5590P | |
| 5605 | 114 aa hypothetical protein | |||
| 21795 | adenine/cytosine-specific restriction | |||
| 21800 | R | Ecos15955ORF12100P (100% identity) | EcoC1736FORF21805P | |
| 21805 | M | M.Ecos15955ORF12100P (99% identity) | M.EcoC1736FORF21805P | |
| 21810 | S | S1.EcoC4072ORF8715P (93% identity) | S1.EcoC1736FORF21805P | |
| 21815 | S | S2.EcoC4072ORF8715P (100% identity) | S2.EcoC1736FORF21805P | |
| 21820 | 23 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 26780 | type II toxin-antitoxin system Phd/YefM family | |||
| 26785 | M | M.EcoC1737ORF25845P (99% identity) | M.EcoC1736FORF26785P | |
| 26790 | S | S.EcoC1737ORF25845P (100% identity) | S.EcoC1736FORF26785P | |
| 26795 | R | EcoC1737ORF25845P (100% identity) | EcoC1736FORF26785P | |
| 26800 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.Eco4063DamP (100% identity) | GATC | M.EcoC1736FDamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.EcoC4072ORF14300P (100% identity) | ATGCAT | M.EcoC1736FORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 7600 | flagella biosynthesis regulator Flk | |||
| 7605 | M | M.Efe65411ORF7205P (100% identity) | M.EcoC1736FORF7605P | |
| 7610 | Com family DNA-binding transcriptional | |||
| 8585 | 59 aa hypothetical protein | |||
| 8590 | M | M.Efe65411ORF7205P (100% identity) | M.EcoC1736FORF8590P | |
| 8595 | Com family DNA-binding transcriptional | |||
| 10950 | phosphohydrolase | |||
| 10955 | M | M.EcoP136DcmP (100% identity) | CCWGG | M.EcoC1736FDcmP |
| ??? | V | V.EcoC4072DcmP (100% identity) | V.EcoC1736FDcmP | |
| 10965 | drug/metabolite exporter YedA | |||
| 12960 | DUF977 family protein | |||
| 12965 | M | M.EcoC4072ORF23345P (100% identity) | M.EcoC1736FORF12965P | |
| 12970 | 139 aa hypothetical protein | |||
| 14585 | Shiga toxin Stx2e subunit A | |||
| 14605 | M | M.Ecocq9ORF19465P (100% identity) | M.EcoC1736FORF14605P | |
| 14610 | TrmB family transcriptional regulator | |||
| 19935 | DUF1317 family protein | |||
| 19940 | M | M.EcoC1737ORF19910P (82% identity) | M.EcoC1736FORF19940P | |
| 19945 | cell division protein ZapA | |||
| plasmid unnamed1 | ||||
| 25580 | 101 aa hypothetical protein | |||
| 25585 | M | M.Sfl2142ORF380P (100% identity) | M.EcoC1736FORF25585P | |
| 25590 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 26260 | 103 aa hypothetical protein | |||
| 26265 | M | M.Ecocq9ORF29710P (100% identity) | M.EcoC1736FORF26265P | |
| 26270 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 26565 | Rop family plasmid primer RNA-binding protein | |||
| 26570 | R | SenUA39ORF5P (100% identity) | GGYRCC | R1.EcoC1736FORF26575P |
| 26575 | M | M.EcoH591ORF4942P (100% identity) | GGYRCC | M1.EcoC1736FORF26575P |
| 26580 | MbeD family mobilization/exclusion protein | |||
| 26585 | MbeB family mobilization protein | |||
| 26590 | relaxase/mobilization nuclease domain-containing | |||
| 26595 | MobC family plasmid mobilization relaxosome | |||
| 26600 | Rop family plasmid primer RNA-binding protein | |||
| 26605 | R | SenUA39ORF5P (100% identity) | GGYRCC | R2.EcoC1736FORF26575P |
| 26610 | M | M.EcoH591ORF4942P (100% identity) | GGYRCC | M2.EcoC1736FORF26575P |
| 26615 | MbeD family mobilization/exclusion protein | |||
| plasmid unnamed5 | ||||
| 26895 | RNA-guided endonuclease TnpB family protein | |||
| 26900 | M | M.EcoC1737ORF25960P (99% identity) | M.EcoC1736FORF26900P | |
| 26905 | recombination-associated protein RdgC | |||
| plasmid unnamed6 | ||||
| 27315 | 73 aa hypothetical protein | |||
| 27320 | M | M.SspPIBORF23080P (100% identity) | M.EcoC1736FORF27320P | |
| 27325 | 103 aa hypothetical protein | |||